RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 ELP3Q9H9T3 547 aa14.24□□□□□ -0.13
APTX-227ENST00000485479 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.24□□□□□ -0.13
APTX-227ENST00000485479 MINDY4BA8MYZ0 360 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 AOC2O75106 756 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 TDO2P48775 406 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 ZNF157P51786 506 aaPredicted RBP14.23□□□□□ -0.13
APTX-227ENST00000485479 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 CRACR2BQ8N4Y2 399 aaPredicted RBP14.23□□□□□ -0.13
APTX-227ENST00000485479 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.23□□□□□ -0.13
APTX-227ENST00000485479 HELLSQ9NRZ9 838 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 GDF11O95390 407 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
APTX-227ENST00000485479 DEFB115Q30KQ5 88 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 TMED8Q6PL24 325 aaPredicted RBP14.23□□□□□ -0.13
APTX-227ENST00000485479 IFNL3Q8IZI9 196 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 PI4KBQ9UBF8 816 aa14.23□□□□□ -0.13
APTX-227ENST00000485479 PHF20L1A8MW92 1017 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
APTX-227ENST00000485479 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 HSPD1P10809 573 aaKnown RBP14.22□□□□□ -0.13
APTX-227ENST00000485479 VEGFBP49765 207 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 JAG1P78504 1218 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 CERS3Q8IU89 383 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 ZNF341Q9BYN7 854 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 RASSF10A6NK89 507 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 DCAF15Q66K64 600 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 RGMBQ6NW40 437 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 CAPNS2Q96L46 248 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 DHX36Q9H2U1 1008 aaKnown RBP14.22□□□□□ -0.13
APTX-227ENST00000485479 INCENPQ9NQS7 918 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 SNCAIPQ9Y6H5 919 aa14.22□□□□□ -0.13
APTX-227ENST00000485479 COL2A1P02458 1487 aaPredicted RBP14.21□□□□□ -0.13
APTX-227ENST00000485479 LAMB1P07942 1786 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 PATL2C9JE40 543 aaKnown RBP14.21□□□□□ -0.13
APTX-227ENST00000485479 HAND2P61296 217 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 LDLRAD1Q5T700 205 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 OTUD5Q96G74 571 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 NAPBQ9H115 298 aa14.21□□□□□ -0.13
APTX-227ENST00000485479 ATAD5Q96QE3 1844 aa14.21□□□□□ -0.14
APTX-227ENST00000485479 PRDM1O75626 825 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 GJA5P36382 358 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 FKBP1BP68106 108 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 MAP3K9P80192 1104 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 CTDSPL2Q05D32 466 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 MAP3K11Q16584 847 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 RASAL3Q86YV0 1011 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 ANKRD13AQ8IZ07 590 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 DDRGK1Q96HY6 314 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 FAM155AB1AL88 458 aaPredicted RBP14.2□□□□□ -0.14
APTX-227ENST00000485479 GNAT2P19087 354 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 PTH1RQ03431 593 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 TTC6Q86TZ1 520 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 DNAJC5GQ8N7S2 189 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 SLC10A4Q96EP9 437 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 CSADQ9Y600 493 aa14.2□□□□□ -0.14
APTX-227ENST00000485479 MYH8P13535 1937 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 HIP1O00291 1037 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 FGAP02671 866 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 SHMT1P34896 483 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 OPTNQ96CV9 577 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 TACC3Q9Y6A5 838 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 DOCK1Q14185 1865 aa14.19□□□□□ -0.14
APTX-227ENST00000485479 GABPAQ06546 454 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 DGKZQ13574 1117 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 ARPP21Q9UBL0 812 aaPredicted RBP14.18□□□□□ -0.14
APTX-227ENST00000485479 ZNF112Q9UJU3 913 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 WDR33Q9C0J8 1336 aaKnown RBP14.18□□□□□ -0.14
APTX-227ENST00000485479 SGSM2O43147 1006 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 SLC10A3P09131 477 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 MAP3K10Q02779 954 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 NACAP1Q9BZK3 213 aa14.18□□□□□ -0.14
APTX-227ENST00000485479 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
APTX-227ENST00000485479 MPHOSPH10O00566 681 aaKnown RBP14.17□□□□□ -0.14
APTX-227ENST00000485479 TBC1D12O60347 775 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 CDK8P49336 464 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 PPARAQ07869 468 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 FOXP4Q8IVH2 680 aaPredicted RBP14.17□□□□□ -0.14
APTX-227ENST00000485479 AMOTL1Q8IY63 956 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 NKX2-3Q8TAU0 364 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 ESYT1Q9BSJ8 1104 aa14.17□□□□□ -0.14
APTX-227ENST00000485479 IRF6O14896 467 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 CDC45O75419 566 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 GH2P01242 217 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 CAP2P40123 477 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 RAB3GAP1Q15042 981 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
APTX-227ENST00000485479 SCYL3Q8IZE3 742 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 WNK4Q96J92 1243 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 NBPF3Q9H094 633 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 EHD4Q9H223 541 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 TAF6LQ9Y6J9 622 aa14.16□□□□□ -0.14
APTX-227ENST00000485479 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms