RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 GCLCP48506 637 aaPredicted RBP8.07□□□□□ -1.12
CAPN13-206ENST00000485248 FPGSQ05932 587 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 FLIIQ13045 1269 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 PABPC4Q13310 644 aaKnown RBP eCLIP8.07□□□□□ -1.12
CAPN13-206ENST00000485248 MFSD14BQ5SR56 506 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 HERVK_113Q902F9 699 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 COG5Q9UP83 839 aa8.07□□□□□ -1.12
CAPN13-206ENST00000485248 RPAP1Q9BWH6 1393 aaPredicted RBP8.07□□□□□ -1.12
CAPN13-206ENST00000485248 FRMPD3Q5JV73 1810 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 PCCAP05165 728 aaPredicted RBP8.06□□□□□ -1.12
CAPN13-206ENST00000485248 KLRK1P26718 216 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 INPP5BP32019 993 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 CRKP46108 304 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 CTSWP56202 376 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 RAB30Q15771 203 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 GPAT2Q6NUI2 795 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 FAM83AQ86UY5 434 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 SLC28A3Q9HAS3 691 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
CAPN13-206ENST00000485248 CWC25Q9NXE8 425 aaPredicted RBP8.06□□□□□ -1.12
CAPN13-206ENST00000485248 AOX1Q06278 1338 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MYH3P11055 1940 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 DLG5Q8TDM6 1919 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 A0A0G2JLL6 359 aaPredicted RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 DPYSL4O14531 572 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 ERC2O15083 957 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 ANP32CO43423 234 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 CCND3P30281 292 aaPredicted RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 TRIM28Q13263 835 aaKnown RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 PPP1R15BQ5SWA1 713 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MAP3K21Q5TCX8 1036 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MFSD14CQ5VZR4 134 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 ERMP1Q7Z2K6 904 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 PRRT2Q7Z6L0 340 aaPredicted RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 ARRDC4Q8NCT1 418 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 CCDC191Q8NCU4 936 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MYD88Q99836 296 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MTIF3Q9H2K0 278 aaKnown RBP8.05□□□□□ -1.12
CAPN13-206ENST00000485248 CHPF2Q9P2E5 772 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 TACC3Q9Y6A5 838 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 ZHX2Q9Y6X8 837 aa8.05□□□□□ -1.12
CAPN13-206ENST00000485248 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 NCOR1O75376 2440 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 XRCC5P13010 732 aaKnown RBP8.04□□□□□ -1.12
CAPN13-206ENST00000485248 PDIA4P13667 645 aaKnown RBP8.04□□□□□ -1.12
CAPN13-206ENST00000485248 ITGB8P26012 769 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 RGS2P41220 211 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 CACNB3P54284 484 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 CACNB2Q08289 660 aaPredicted RBP8.04□□□□□ -1.12
CAPN13-206ENST00000485248 TRIM60Q495X7 471 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 NOL9Q5SY16 702 aaKnown RBP8.04□□□□□ -1.12
CAPN13-206ENST00000485248 HDGFL1Q5TGJ6 251 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 LPAR1Q92633 364 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 TEKT1Q969V4 418 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 KIF12Q96FN5 646 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 PBX4Q9BYU1 374 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 PDLIM7Q9NR12 457 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 HYPKQ9NX55 129 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 DBF4Q9UBU7 674 aaPredicted RBP8.04□□□□□ -1.12
CAPN13-206ENST00000485248 AGTPBP1Q9UPW5 1226 aa8.04□□□□□ -1.12
CAPN13-206ENST00000485248 PLXNA1Q9UIW2 1896 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 TRIM75PA6NK02 468 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 SPDYE16A6NNV3 312 aaPredicted RBP8.03□□□□□ -1.12
CAPN13-206ENST00000485248 GFRA3O60609 400 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 CLTBP09497 229 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 IL1R1P14778 569 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 PTPN5P54829 565 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 DDX10Q13206 875 aaKnown RBP8.03□□□□□ -1.12
CAPN13-206ENST00000485248 MOGSQ13724 837 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 LHX8Q68G74 356 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 SLC39A5Q6ZMH5 540 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 MFSD14AQ96MC6 490 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 GREM2Q9H772 168 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 DDX20Q9UHI6 824 aaKnown RBP8.03□□□□□ -1.12
CAPN13-206ENST00000485248 MAST3O60307 1309 aa8.03□□□□□ -1.12
CAPN13-206ENST00000485248 DOCK3Q8IZD9 2030 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 FRAT2O75474 233 aaPredicted RBP8.02□□□□□ -1.13
CAPN13-206ENST00000485248 CHRNDQ07001 517 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 ADGRE1Q14246 886 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 VPS37DQ86XT2 251 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 SCYL3Q8IZE3 742 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 JARID2Q92833 1246 aaPredicted RBP8.02□□□□□ -1.13
CAPN13-206ENST00000485248 HLA-CQ95604 372 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 APBA2Q99767 749 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 PNNQ9H307 717 aaKnown RBP8.02□□□□□ -1.13
CAPN13-206ENST00000485248 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
CAPN13-206ENST00000485248 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 GJD2Q9UKL4 321 aa8.02□□□□□ -1.13
CAPN13-206ENST00000485248 LRRFIP2Q9Y608 721 aaKnown RBP8.02□□□□□ -1.13
CAPN13-206ENST00000485248 BDP1A6H8Y1 2624 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 GLRX3O76003 335 aaKnown RBP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 DDX58O95786 925 aaKnown RBP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 MAPK4P31152 587 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 PBX2P40425 430 aa8.01□□□□□ -1.13
CAPN13-206ENST00000485248 IRX3P78415 501 aaPredicted RBP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 PPIGQ13427 754 aaKnown RBP eCLIP8.01□□□□□ -1.13
CAPN13-206ENST00000485248 NFE2L2Q16236 605 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms