RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MAP3K11Q16584 847 aa7.49□□□□□ -1.21
SMC4-215ENST00000484799 ZBTB37Q5TC79 503 aa7.49□□□□□ -1.21
SMC4-215ENST00000484799 PI4K2BQ8TCG2 481 aa7.49□□□□□ -1.21
SMC4-215ENST00000484799 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
SMC4-215ENST00000484799 MRS2Q9HD23 443 aa7.49□□□□□ -1.21
SMC4-215ENST00000484799 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
SMC4-215ENST00000484799 TPX2Q9ULW0 747 aaKnown RBP7.49□□□□□ -1.21
SMC4-215ENST00000484799 MIR1-1HGQ9H1L0 117 aa7.48□□□□□ -1.21
SMC4-215ENST00000484799 FAM155AB1AL88 458 aaPredicted RBP7.47□□□□□ -1.21
SMC4-215ENST00000484799 LRIG2O94898 1065 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 CEACAM5P06731 702 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 INPP5AQ14642 412 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 PRDM5Q9NQX1 630 aaPredicted RBP7.47□□□□□ -1.21
SMC4-215ENST00000484799 CACNA2D2Q9NY47 1150 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 PARP2Q9UGN5 583 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 SNX11Q9Y5W9 270 aa7.47□□□□□ -1.21
SMC4-215ENST00000484799 JUNBP17275 347 aaPredicted RBP7.46□□□□□ -1.22
SMC4-215ENST00000484799 RPS26P62854 115 aaKnown RBP7.46□□□□□ -1.22
SMC4-215ENST00000484799 TAF1CQ15572 869 aaPredicted RBP7.46□□□□□ -1.22
SMC4-215ENST00000484799 LRFN4Q6PJG9 635 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 HID1Q8IV36 788 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 ASB11Q8WXH4 323 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 PLPPR2Q96GM1 343 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
SMC4-215ENST00000484799 IGF2BP3O00425 579 aaKnown RBP eCLIP7.45□□□□□ -1.22
SMC4-215ENST00000484799 CYP7A1P22680 504 aa7.45□□□□□ -1.22
SMC4-215ENST00000484799 OXCT1P55809 520 aa7.45□□□□□ -1.22
SMC4-215ENST00000484799 WIPI1Q5MNZ9 446 aaPredicted RBP7.45□□□□□ -1.22
SMC4-215ENST00000484799 ANGEL2Q5VTE6 544 aaKnown RBP7.45□□□□□ -1.22
SMC4-215ENST00000484799 ZNF574Q6ZN55 896 aaPredicted RBP7.45□□□□□ -1.22
SMC4-215ENST00000484799 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
SMC4-215ENST00000484799 MFSD2AQ8NA29 543 aa7.45□□□□□ -1.22
SMC4-215ENST00000484799 JARID2Q92833 1246 aaPredicted RBP7.45□□□□□ -1.22
SMC4-215ENST00000484799 CD8BP10966 210 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 PDE4BQ07343 736 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 IKZF1Q13422 519 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 ZNF792Q3KQV3 632 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 RASIP1Q5U651 963 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 ZNF746Q6NUN9 644 aaPredicted RBP7.44□□□□□ -1.22
SMC4-215ENST00000484799 SPRED2Q7Z698 418 aa7.44□□□□□ -1.22
SMC4-215ENST00000484799 GZF1Q9H116 711 aaPredicted RBP7.44□□□□□ -1.22
SMC4-215ENST00000484799 ERCC3P19447 782 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 LIG3P49916 1009 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 PTPN11Q06124 597 aaPredicted RBP7.43□□□□□ -1.22
SMC4-215ENST00000484799 RING1Q06587 406 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 TSNAXIP1Q2TAA8 658 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 CYFIP1Q7L576 1253 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 RELL1Q8IUW5 271 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 MIPEPQ99797 713 aa7.43□□□□□ -1.22
SMC4-215ENST00000484799 RC3H2Q9HBD1 1191 aaKnown RBP7.43□□□□□ -1.22
SMC4-215ENST00000484799 SORBS3O60504 671 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 BPNT1O95861 308 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 GRK4P32298 578 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 DAB2P98082 770 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 SEPT6Q14141 434 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 SFRP5Q5T4F7 317 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
SMC4-215ENST00000484799 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 PCDHB5Q9Y5E4 795 aa7.42□□□□□ -1.22
SMC4-215ENST00000484799 PGRP06401 933 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 FUT4P22083 530 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 CHMP4BP1P59074 171 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.41□□□□□ -1.22
SMC4-215ENST00000484799 AGMOQ6ZNB7 445 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 FMNL2Q96PY5 1086 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
SMC4-215ENST00000484799 GOLGA2P5Q9HBQ8 144 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 PLAGL2Q9UPG8 496 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 MAPK8IP1Q9UQF2 711 aa7.41□□□□□ -1.22
SMC4-215ENST00000484799 CBX7O95931 251 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 CD96P40200 585 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 ZP2Q05996 745 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 MEI1Q5TIA1 1274 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 CDKAL1Q5VV42 579 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 CBLL1Q75N03 491 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 UBE3DQ7Z6J8 389 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 RNF19AQ9NV58 838 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 TACC3Q9Y6A5 838 aa7.4□□□□□ -1.22
SMC4-215ENST00000484799 EOMESO95936 686 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC4-215ENST00000484799 ST13P50502 369 aaKnown RBP7.39□□□□□ -1.23
SMC4-215ENST00000484799 CLCN7P51798 805 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 LETMD1Q6P1Q0 360 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 SLC23A3Q6PIS1 610 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 FAM161BQ96MY7 647 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 FBRSQ9HAH7 460 aa7.39□□□□□ -1.23
SMC4-215ENST00000484799 SLITRK5O94991 958 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 NTF4P34130 210 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 PWP1Q13610 501 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 SLBPQ14493 270 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMC4-215ENST00000484799 ZNF326Q5BKZ1 582 aaKnown RBP7.38□□□□□ -1.23
SMC4-215ENST00000484799 PRAMEF13Q5VWM6 474 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 NFXL1Q6ZNB6 911 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 ATG4DQ86TL0 474 aaPredicted RBP7.38□□□□□ -1.23
SMC4-215ENST00000484799 NPAS4Q8IUM7 802 aa7.38□□□□□ -1.23
SMC4-215ENST00000484799 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms