RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 LRIT3Q3SXY7 679 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 HMX1Q9NP08 348 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 MTMR10Q9NXD2 777 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 GJD2Q9UKL4 321 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 STXBP5LQ9Y2K9 1186 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
HLA-DQB1-208ENST00000484729 ADORA1P30542 326 aa18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 SPP2Q13103 211 aa18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 DZIP1Q86YF9 867 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 TDHQ8IZJ6 230 aa18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 COPRSQ9NQ92 184 aa18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 PNMA3Q9UL41 463 aa18.97■□□□□ 0.63
HLA-DQB1-208ENST00000484729 SEMA3EO15041 775 aa18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 GNAI3P08754 354 aa18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 BTDP43251 543 aa18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 UBE2OQ9C0C9 1292 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 ABCF2Q9UG63 623 aa18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 DDX60LQ5H9U9 1706 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
HLA-DQB1-208ENST00000484729 HMGCS2P54868 508 aa18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 CCDC102BQ68D86 513 aa18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TRIB2Q92519 343 aa18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
HLA-DQB1-208ENST00000484729 SRGAP3O43295 1099 aa18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PEX10O60683 326 aa18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 GCLCP48506 637 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 RASGRF1Q13972 1273 aa18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ZGPATQ8N5A5 531 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 OGDHLQ9ULD0 1010 aa18.94■□□□□ 0.62
HLA-DQB1-208ENST00000484729 CYP2B6P20813 491 aa18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 RRP1BQ14684 758 aaKnown RBP18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 FAM163AQ96GL9 167 aaPredicted RBP18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 COL25A1Q9BXS0 654 aaPredicted RBP18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PFASO15067 1338 aa18.93■□□□□ 0.62
HLA-DQB1-208ENST00000484729 A0A1B0GUL7 405 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TBC1D12O60347 775 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 RHBDL3P58872 404 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TIMM10P62072 90 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 SLF2Q8IX21 1173 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 FRAT1Q92837 279 aaPredicted RBP18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PLXNB2O15031 1838 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MROH7-TTC4A0A0A0MT08 1334 aa18.92■□□□□ 0.62
HLA-DQB1-208ENST00000484729 LOC285556D6RIA3 1793 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PRKAR2AP13861 404 aaKnown RBP18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TRIM27P14373 513 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MECOMQ03112 1051 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TFCP2Q12800 502 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ZNF384Q8TF68 577 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 OSBPL5Q9H0X9 879 aaPredicted RBP18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 TNNQ9UQP3 1299 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 AKAP2Q9Y2D5 859 aa18.91■□□□□ 0.62
HLA-DQB1-208ENST00000484729 GPR75-ASB3A0A0A6YYF3 556 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MDM2Q00987 491 aaPredicted RBP18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MTX1Q13505 466 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MVPQ14764 893 aaKnown RBP18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 MAP3K21Q5TCX8 1036 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 ATF7IPQ6VMQ6 1270 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 CLUAP1Q96AJ1 413 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 XAGE2Q96GT9 111 aa18.9■□□□□ 0.62
HLA-DQB1-208ENST00000484729 USP17L5A8MUK1 530 aa18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 BCAR3O75815 825 aa18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 CAP2P40123 477 aa18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 LRRC26Q2I0M4 334 aa18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 SPTY2D1Q68D10 685 aaPredicted RBP18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 MORF4L1Q9UBU8 362 aa18.89■□□□□ 0.61
HLA-DQB1-208ENST00000484729 ZBTB22O15209 634 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 GNAI2P04899 355 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 SH3D19Q5HYK7 790 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 ERICH6Q7L0X2 663 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 NEUROD6Q96NK8 337 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 TXNRD2Q9NNW7 524 aa18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 PDS5AQ29RF7 1337 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-208ENST00000484729 COL6A1P12109 1028 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 LAMA2P24043 3122 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 CCND3P30281 292 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 IRX3P78415 501 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 MTMR2Q13614 643 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 FAM161BQ96MY7 647 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 ATAD5Q96QE3 1844 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
HLA-DQB1-208ENST00000484729 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 CCL14Q16627 93 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 LHX8Q68G74 356 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 PI16Q6UXB8 463 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 TBC1D9Q6ZT07 1266 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 GUCD1Q96NT3 240 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.86■□□□□ 0.61
HLA-DQB1-208ENST00000484729 PNMA6EA0A0J9YXQ4 647 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms