RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ANTXR1Q9H6X2 564 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 PIH1D3Q9NQM4 214 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 GNL3LQ9NVN8 582 aaKnown RBP8.35□□□□□ -1.07
BRCA1-216ENST00000484087 WBP1LQ9NX94 342 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 CENPFP49454 3210 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
BRCA1-216ENST00000484087 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 MYH7P12883 1935 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 CHGBP05060 677 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-216ENST00000484087 HSPA8P11142 646 aaKnown RBP8.34□□□□□ -1.07
BRCA1-216ENST00000484087 GJA5P36382 358 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 BTDP43251 543 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 PICALMQ13492 652 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 SLFNL1Q499Z3 407 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 TSHZ3Q63HK5 1081 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 MIGA2Q7L4E1 593 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 HSCBQ8IWL3 235 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 DDX4Q9NQI0 724 aaKnown RBP8.34□□□□□ -1.07
BRCA1-216ENST00000484087 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 RAI14Q9P0K7 980 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-216ENST00000484087 FAM198AQ9UFP1 575 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 ZSWIM8A7E2V4 1837 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 RFX7Q2KHR2 1363 aa8.34□□□□□ -1.07
BRCA1-216ENST00000484087 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 MROH7-TTC4A0A0A0MT08 1334 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 MAST3O60307 1309 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 SEMA3EO15041 775 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-216ENST00000484087 MCCP23508 829 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 NF2P35240 595 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 AIDAQ96BJ3 306 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 NSUN4Q96CB9 384 aaKnown RBP8.33□□□□□ -1.08
BRCA1-216ENST00000484087 ELP3Q9H9T3 547 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 USP40Q9NVE5 1235 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 HTTP42858 3142 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 GAKO14976 1311 aa8.33□□□□□ -1.08
BRCA1-216ENST00000484087 DYNLL1P63167 89 aaKnown RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 NOGQ13253 232 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 HHIPL2Q6UWX4 724 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 HHIPL1Q96JK4 782 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 CSRNP1Q96S65 589 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 GPR108Q9NPR9 543 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 WDR70Q9NW82 654 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 DOCK1Q14185 1865 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 BRCA2P51587 3418 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 MYH1P12882 1939 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 DDX60LQ5H9U9 1706 aaKnown RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 PHIPQ8WWQ0 1821 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 DDTLA6NHG4 134 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 EPB41L2O43491 1005 aaKnown RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 WDHD1O75717 1129 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 TRPA1O75762 1119 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 INPP5BP32019 993 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 RHBDL3P58872 404 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 HDLBPQ00341 1268 aaKnown RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 MAP2K1Q02750 393 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 TNFAIP1Q13829 316 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 VGLL4Q14135 290 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 CCDC158Q5M9N0 1113 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 LDLRAD1Q5T700 205 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 ARMC9Q7Z3E5 817 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 CCDC84Q86UT8 332 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 MIGA1Q8NAN2 632 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 SH3RF3Q8TEJ3 882 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 RUFY2Q8WXA3 655 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 ZKSCAN4Q969J2 545 aaPredicted RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 DNAJC2Q99543 621 aaKnown RBP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 AATFQ9NY61 560 aaKnown RBP eCLIP8.32□□□□□ -1.08
BRCA1-216ENST00000484087 TMOD2Q9NZR1 351 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 LRP2BPQ9P2M1 347 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 SUGT1Q9Y2Z0 365 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 PPP2R3BQ9Y5P8 575 aa8.32□□□□□ -1.08
BRCA1-216ENST00000484087 PDS5AQ29RF7 1337 aaKnown RBP8.31□□□□□ -1.08
BRCA1-216ENST00000484087 PTPRFP10586 1907 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 BAZ2AQ9UIF9 1905 aaKnown RBP8.31□□□□□ -1.08
BRCA1-216ENST00000484087 HIP1O00291 1037 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 IDH1O75874 414 aaKnown RBP8.31□□□□□ -1.08
BRCA1-216ENST00000484087 UQCRFS1P1P0C7P4 283 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 MAP2K2P36507 400 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 TNNI2P48788 182 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 MMP14P50281 582 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 FKBP1BP68106 108 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 RABEP1Q15276 862 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 TMEM132AQ24JP5 1023 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 ZGPATQ8N5A5 531 aaKnown RBP8.31□□□□□ -1.08
BRCA1-216ENST00000484087 PI4K2BQ8TCG2 481 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 WRNIP1Q96S55 665 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 R3HDMLQ9H3Y0 253 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 RNF186Q9NXI6 227 aa8.31□□□□□ -1.08
BRCA1-216ENST00000484087 ATRNL1Q5VV63 1379 aa8.3□□□□□ -1.08
BRCA1-216ENST00000484087 IGF2BP3O00425 579 aaKnown RBP eCLIP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms