RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 ZSCAN10Q96SZ4 725 aaPredicted RBP15.72■□□□□ 0.11
RXRB-205ENST00000483821 ROBO3Q96MS0 1386 aa15.72■□□□□ 0.11
RXRB-205ENST00000483821 CHD4Q14839 1912 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 CCDC196A0A1B0GTZ2 297 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 ZBTB43O43298 467 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 SCRN1Q12765 414 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 CDC42EP5Q6NZY7 148 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 FAM184AQ8NB25 1140 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 TNPO1Q92973 898 aaKnown RBP15.71■□□□□ 0.11
RXRB-205ENST00000483821 DHX36Q9H2U1 1008 aaKnown RBP15.71■□□□□ 0.11
RXRB-205ENST00000483821 LY9Q9HBG7 655 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 INCENPQ9NQS7 918 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 ATP6V1DQ9Y5K8 247 aa15.71■□□□□ 0.11
RXRB-205ENST00000483821 TSPY2A6NKD2 308 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 PSMD14O00487 310 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 RAD17O75943 681 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 BRD1O95696 1058 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 HLA-DOAP06340 250 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 CYP2D6P10635 497 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 LARP1BQ659C4 914 aaKnown RBP15.7■□□□□ 0.1
RXRB-205ENST00000483821 CIAPIN1Q6FI81 312 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 CLEC17AQ6ZS10 378 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 STK11IPQ8N1F8 1099 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 SAP30BPQ9UHR5 308 aaKnown RBP15.7■□□□□ 0.1
RXRB-205ENST00000483821 BRPF3Q9ULD4 1205 aa15.7■□□□□ 0.1
RXRB-205ENST00000483821 DDX11L8A8MPP1 907 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 STX6O43752 255 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 WDHD1O75717 1129 aaPredicted RBP15.69■□□□□ 0.1
RXRB-205ENST00000483821 CALM1P0DP23 149 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 CALM2P0DP24 149 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 CALM3P0DP25 149 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 RPS12P25398 132 aaKnown RBP15.69■□□□□ 0.1
RXRB-205ENST00000483821 METAP2P50579 478 aaKnown RBP eCLIP15.69■□□□□ 0.1
RXRB-205ENST00000483821 CCT2P78371 535 aaKnown RBP15.69■□□□□ 0.1
RXRB-205ENST00000483821 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 APOA5Q6Q788 366 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 C16orf86Q6ZW13 317 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 RGS22Q8NE09 1264 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 SMARCC2Q8TAQ2 1214 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 IDI2Q9BXS1 227 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 GPHNQ9NQX3 736 aaPredicted RBP15.69■□□□□ 0.1
RXRB-205ENST00000483821 TCP11L1Q9NUJ3 509 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 SWAP70Q9UH65 585 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 TACC3Q9Y6A5 838 aa15.69■□□□□ 0.1
RXRB-205ENST00000483821 NFKBIEO00221 500 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 PRDM1O75626 825 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 SYT1P21579 422 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 EIF6P56537 245 aaKnown RBP15.68■□□□□ 0.1
RXRB-205ENST00000483821 PICALMQ13492 652 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 DLGAP5Q15398 846 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 CFAP100Q494V2 611 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 IFIT1BQ5T764 474 aaKnown RBP15.68■□□□□ 0.1
RXRB-205ENST00000483821 CATIPQ7Z7H3 387 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 GMLQ99445 158 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 OSBPL5Q9H0X9 879 aaPredicted RBP15.68■□□□□ 0.1
RXRB-205ENST00000483821 TNKSO95271 1327 aa15.68■□□□□ 0.1
RXRB-205ENST00000483821 GOLGA8AA7E2F4 631 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 ENTPD3O75355 529 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
RXRB-205ENST00000483821 MCM4P33991 863 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 CDK8P49336 464 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 PLCD1P51178 756 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 TFAP4Q01664 338 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 CXCL9Q07325 125 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 SEC23AQ15436 765 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 DGKHQ86XP1 1220 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 MTMR14Q8NCE2 650 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
RXRB-205ENST00000483821 HPS5Q9UPZ3 1129 aa15.67■□□□□ 0.1
RXRB-205ENST00000483821 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 MYO1BO43795 1136 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 DDAH1O94760 285 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 FOXP4Q8IVH2 680 aaPredicted RBP15.66■□□□□ 0.1
RXRB-205ENST00000483821 ZNF654Q8IZM8 581 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 ENAHQ8N8S7 591 aaPredicted RBP15.66■□□□□ 0.1
RXRB-205ENST00000483821 NLGN2Q8NFZ4 835 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 ANKS1AQ92625 1134 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 DYNLL2Q96FJ2 89 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 ANP32EQ9BTT0 268 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 EHD4Q9H223 541 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 SERPINB13Q9UIV8 391 aa15.66■□□□□ 0.1
RXRB-205ENST00000483821 NID2Q14112 1375 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 BAZ2AQ9UIF9 1905 aaKnown RBP15.65■□□□□ 0.1
RXRB-205ENST00000483821 H3BQV1 296 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 NBR1Q14596 966 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 RTN1Q16799 776 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 IFFO2Q5TF58 517 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 FKBP1CQ5VVH2 108 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 MICU3Q86XE3 530 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 WASF1Q92558 559 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 TRIM34Q9BYJ4 488 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 NCOA5Q9HCD5 579 aaKnown RBP15.65■□□□□ 0.1
RXRB-205ENST00000483821 RBM28Q9NW13 759 aaKnown RBP15.65■□□□□ 0.1
RXRB-205ENST00000483821 PI4KBQ9UBF8 816 aa15.65■□□□□ 0.1
RXRB-205ENST00000483821 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms