RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 TICAM2Q86XR7 235 aa31.12■■■□□ 2.57
PDCD4-208ENST00000483670 SCYL3Q8IZE3 742 aa31.12■■■□□ 2.57
PDCD4-208ENST00000483670 OTUD5Q96G74 571 aa31.12■■■□□ 2.57
PDCD4-208ENST00000483670 PICK1Q9NRD5 415 aa31.12■■■□□ 2.57
PDCD4-208ENST00000483670 PALD1Q9ULE6 856 aa31.12■■■□□ 2.57
PDCD4-208ENST00000483670 MBD4O95243 580 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 GJA5P36382 358 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 OTUD7BQ6GQQ9 843 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 LCORLQ8N3X6 602 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 CRACR2BQ8N4Y2 399 aaPredicted RBP31.11■■■□□ 2.57
PDCD4-208ENST00000483670 NAV1Q8NEY1 1877 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 APPBP2Q92624 585 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 PRDM10Q9NQV6 1147 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 RNF186Q9NXI6 227 aa31.11■■■□□ 2.57
PDCD4-208ENST00000483670 DOCK1Q14185 1865 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 HSPA8P11142 646 aaKnown RBP31.1■■■□□ 2.57
PDCD4-208ENST00000483670 EVI5LQ96CN4 794 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 DDRGK1Q96HY6 314 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 FSD1Q9BTV5 496 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 EHD4Q9H223 541 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 ARMT1Q9H993 441 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 ATP8A2Q9NTI2 1148 aa31.1■■■□□ 2.57
PDCD4-208ENST00000483670 TESPA1A2RU30 521 aaPredicted RBP31.09■■■□□ 2.57
PDCD4-208ENST00000483670 OSBPL3Q9H4L5 887 aa31.09■■■□□ 2.57
PDCD4-208ENST00000483670 SAP30BPQ9UHR5 308 aaKnown RBP31.09■■■□□ 2.57
PDCD4-208ENST00000483670 TAOK2Q9UL54 1235 aa31.09■■■□□ 2.57
PDCD4-208ENST00000483670 SIPA1L1O43166 1804 aa31.09■■■□□ 2.57
PDCD4-208ENST00000483670 DDX60LQ5H9U9 1706 aaKnown RBP31.08■■■□□ 2.57
PDCD4-208ENST00000483670 SNAPC2Q13487 334 aa31.08■■■□□ 2.57
PDCD4-208ENST00000483670 CNKSR2Q8WXI2 1034 aa31.08■■■□□ 2.57
PDCD4-208ENST00000483670 TRPA1O75762 1119 aa31.07■■■□□ 2.56
PDCD4-208ENST00000483670 IFNL1Q8IU54 200 aa31.07■■■□□ 2.56
PDCD4-208ENST00000483670 MS4A4AQ96JQ5 239 aa31.07■■■□□ 2.56
PDCD4-208ENST00000483670 PUS7LQ9H0K6 701 aaKnown RBP31.07■■■□□ 2.56
PDCD4-208ENST00000483670 DCP1AQ9NPI6 582 aaPredicted RBP31.07■■■□□ 2.56
PDCD4-208ENST00000483670 GINM1Q9NU53 330 aa31.07■■■□□ 2.56
PDCD4-208ENST00000483670 SERPINB13Q9UIV8 391 aa31.07■■■□□ 2.56
PDCD4-208ENST00000483670 CETPP11597 493 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 LBX1P52954 281 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 SLFNL1Q499Z3 407 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 PLEKHM2Q8IWE5 1019 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 CFHR5Q9BXR6 569 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 TBC1D2Q9BYX2 928 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 MCM9Q9NXL9 1143 aa31.06■■■□□ 2.56
PDCD4-208ENST00000483670 IRF6O14896 467 aa31.05■■■□□ 2.56
PDCD4-208ENST00000483670 POLR3DP05423 398 aaPredicted RBP31.05■■■□□ 2.56
PDCD4-208ENST00000483670 CAP2P40123 477 aa31.05■■■□□ 2.56
PDCD4-208ENST00000483670 AMOTL1Q8IY63 956 aa31.05■■■□□ 2.56
PDCD4-208ENST00000483670 SDR42E1Q8WUS8 393 aa31.05■■■□□ 2.56
PDCD4-208ENST00000483670 CCL15-CCL14A0A0B4J2E2 113 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 FAM196BA6NMK8 535 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 PTPRAP18433 802 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 GNAT2P19087 354 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 CCL15Q16663 113 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 KCNH4Q9UQ05 1017 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 SLC4A4Q9Y6R1 1079 aa31.04■■■□□ 2.56
PDCD4-208ENST00000483670 ATAD5Q96QE3 1844 aa31.03■■■□□ 2.56
PDCD4-208ENST00000483670 CXCL11O14625 94 aa31.03■■■□□ 2.56
PDCD4-208ENST00000483670 CHGBP05060 677 aa31.03■■■□□ 2.56
PDCD4-208ENST00000483670 SLURP2P0DP57 97 aa31.02■■■□□ 2.56
PDCD4-208ENST00000483670 OSBP2Q969R2 916 aa31.02■■■□□ 2.56
PDCD4-208ENST00000483670 STRBPQ96SI9 672 aaKnown RBP31.02■■■□□ 2.56
PDCD4-208ENST00000483670 ZCCHC17Q9NP64 241 aaKnown RBP31.02■■■□□ 2.56
PDCD4-208ENST00000483670 ZHX2Q9Y6X8 837 aa31.02■■■□□ 2.56
PDCD4-208ENST00000483670 CENPBP07199 599 aaPredicted RBP31.01■■■□□ 2.55
PDCD4-208ENST00000483670 ASNSP08243 561 aa31.01■■■□□ 2.55
PDCD4-208ENST00000483670 GIMAP6Q6P9H5 292 aa31.01■■■□□ 2.55
PDCD4-208ENST00000483670 DNAJC18Q9H819 358 aa31.01■■■□□ 2.55
PDCD4-208ENST00000483670 TSKSQ9UJT2 592 aa31.01■■■□□ 2.55
PDCD4-208ENST00000483670 IGF2BP3O00425 579 aaKnown RBP eCLIP31■■■□□ 2.55
PDCD4-208ENST00000483670 NOM1Q5C9Z4 860 aaKnown RBP31■■■□□ 2.55
PDCD4-208ENST00000483670 ZMYM1Q5SVZ6 1142 aa31■■■□□ 2.55
PDCD4-208ENST00000483670 BRI3BPQ8WY22 251 aa31■■■□□ 2.55
PDCD4-208ENST00000483670 TRIM6-TRIM34B2RNG4 842 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 GPAA1O43292 621 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 PRKAB2O43741 272 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 SLC4A8Q2Y0W8 1093 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 TATDN1Q6P1N9 297 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 AFG3L2Q9Y4W6 797 aa30.99■■■□□ 2.55
PDCD4-208ENST00000483670 BAZ2AQ9UIF9 1905 aaKnown RBP30.98■■■□□ 2.55
PDCD4-208ENST00000483670 PLCD1P51178 756 aa30.98■■■□□ 2.55
PDCD4-208ENST00000483670 PTPN18Q99952 460 aa30.98■■■□□ 2.55
PDCD4-208ENST00000483670 AS3MTQ9HBK9 375 aa30.98■■■□□ 2.55
PDCD4-208ENST00000483670 ARPP21Q9UBL0 812 aaPredicted RBP30.98■■■□□ 2.55
PDCD4-208ENST00000483670 SWAP70Q9UH65 585 aa30.98■■■□□ 2.55
PDCD4-208ENST00000483670 PHIPQ8WWQ0 1821 aa30.98■■■□□ 2.55
PDCD4-208ENST00000483670 NEFLP07196 543 aa30.97■■■□□ 2.55
PDCD4-208ENST00000483670 USP17L5A8MUK1 530 aa30.96■■■□□ 2.55
PDCD4-208ENST00000483670 GABPAQ06546 454 aa30.96■■■□□ 2.55
PDCD4-208ENST00000483670 FASTKD5Q7L8L6 764 aaKnown RBP30.96■■■□□ 2.55
PDCD4-208ENST00000483670 M0R2C6 588 aa30.95■■■□□ 2.55
PDCD4-208ENST00000483670 HELLSQ9NRZ9 838 aa30.95■■■□□ 2.55
PDCD4-208ENST00000483670 A0A0G2JLL6 359 aaPredicted RBP30.94■■■□□ 2.54
PDCD4-208ENST00000483670 TBC1D8O95759 1140 aa30.94■■■□□ 2.54
PDCD4-208ENST00000483670 RRP1BQ14684 758 aaKnown RBP30.94■■■□□ 2.54
PDCD4-208ENST00000483670 CERKLQ49MI3 558 aaPredicted RBP30.94■■■□□ 2.54
PDCD4-208ENST00000483670 C12orf60Q5U649 245 aa30.94■■■□□ 2.54
PDCD4-208ENST00000483670 PRRT2Q7Z6L0 340 aaPredicted RBP30.94■■■□□ 2.54
PDCD4-208ENST00000483670 ANKRD23Q86SG2 305 aa30.94■■■□□ 2.54
PDCD4-208ENST00000483670 ZNF280CQ8ND82 737 aa30.94■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms