RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 IGHMBP2P38935 993 aaKnown RBP7.5□□□□□ -1.21
CSDE1-207ENST00000483407 MMP14P50281 582 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 KSR2Q6VAB6 950 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 CTU1Q7Z7A3 348 aaKnown RBP7.5□□□□□ -1.21
CSDE1-207ENST00000483407 RASAL3Q86YV0 1011 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 PI4KAP1Q8N8J0 262 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 TTLL11Q8NHH1 800 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 GMLQ99445 158 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 COA1Q9GZY4 146 aa7.5□□□□□ -1.21
CSDE1-207ENST00000483407 FCF1Q9Y324 198 aaKnown RBP7.5□□□□□ -1.21
CSDE1-207ENST00000483407 MAGEB6P1A0A0J9YX57 407 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L15C9J2P7 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L13C9JLJ4 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L12C9JPN9 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L11C9JVI0 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L21D6R901 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L18D6R9N7 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L22D6RA61 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L17D6RBQ6 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L19D6RCP7 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L20D6RJB6 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 IGKV5-2P06315 115 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
CSDE1-207ENST00000483407 USP17L24Q0WX57 530 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 PTK7Q13308 1070 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 PKN2Q16513 984 aaKnown RBP7.49□□□□□ -1.21
CSDE1-207ENST00000483407 TSGA10IPQ3SY00 556 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 CRTC2Q53ET0 693 aaPredicted RBP7.49□□□□□ -1.21
CSDE1-207ENST00000483407 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 STRIP1Q5VSL9 837 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 STK32AQ8WU08 396 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 MPHOSPH8Q99549 860 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 GREM2Q9H772 168 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 HDAC9Q9UKV0 1011 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 MINPP1Q9UNW1 487 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 LEMD3Q9Y2U8 911 aa7.49□□□□□ -1.21
CSDE1-207ENST00000483407 COL4A1P02462 1669 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 NEURL1BA8MQ27 555 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 UBE2Q2LH0YL09 131 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 WNT10BO00744 389 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 KCNJ4P48050 445 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 SOX10P56693 466 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 EML3Q32P44 896 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 NBPF9Q3BBW0 867 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 DACT2Q5SW24 774 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 ZNF787Q6DD87 383 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 TTLL5Q6EMB2 1281 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 ARMC9Q7Z3E5 817 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 UBE3BQ7Z3V4 1068 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 APOBEC3FQ8IUX4 373 aaKnown RBP7.48□□□□□ -1.21
CSDE1-207ENST00000483407 TSPYL6Q8N831 410 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 FOXJ1Q92949 421 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 C1QTNF2Q9BXJ5 285 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
CSDE1-207ENST00000483407 TAF1P21675 1872 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 H7C1W4 665 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 TNRC18O15417 2968 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-207ENST00000483407 RASA1P20936 1047 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 ITGA6P23229 1130 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 AGERQ15109 404 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 CWF19L2Q2TBE0 894 aaKnown RBP7.47□□□□□ -1.21
CSDE1-207ENST00000483407 TWISTNBQ3B726 338 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-207ENST00000483407 TMCO4Q5TGY1 634 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 PRAMEF18Q5VWM3 479 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 MOB2Q70IA6 237 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 TSR2Q969E8 191 aaKnown RBP7.47□□□□□ -1.21
CSDE1-207ENST00000483407 MXD3Q9BW11 206 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 MYH16Q9H6N6 1097 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 SCAF8Q9UPN6 1271 aaKnown RBP7.47□□□□□ -1.21
CSDE1-207ENST00000483407 ZNF804BA4D1E1 1349 aa7.47□□□□□ -1.21
CSDE1-207ENST00000483407 PAPPA2Q9BXP8 1791 aa7.46□□□□□ -1.21
CSDE1-207ENST00000483407 CASP8AP2Q9UKL3 1982 aa7.46□□□□□ -1.21
CSDE1-207ENST00000483407 WTIPA6NIX2 430 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 NRG2O14511 850 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 SASH1O94885 1247 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 TBC1D8O95759 1140 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 TM4SF4P48230 202 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 SH3BP2P78314 561 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 GTF2IP78347 998 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 FKBP5Q13451 457 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 GCKRQ14397 625 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 CCDC27Q2M243 656 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 RNF20Q5VTR2 975 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 B4GALNT3Q6L9W6 998 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 TRIM50Q86XT4 487 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 KIAA0825Q8IV33 1275 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 TRMT44Q8IYL2 757 aaKnown RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 ZNF296Q8WUU4 475 aaPredicted RBP7.46□□□□□ -1.22
CSDE1-207ENST00000483407 PLA2G12BQ9BX93 195 aa7.46□□□□□ -1.22
CSDE1-207ENST00000483407 PDE4DIPQ5VU43 2346 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 ANKRD18BA2A2Z9 1011 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 GPR25O00155 361 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 MYO1BO43795 1136 aa7.45□□□□□ -1.22
CSDE1-207ENST00000483407 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms