RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 GNAT2P19087 354 aa19.57■□□□□ 0.72
COL2A1-206ENST00000483376 INPP5BP32019 993 aa19.57■□□□□ 0.72
COL2A1-206ENST00000483376 INHBEP58166 350 aa19.57■□□□□ 0.72
COL2A1-206ENST00000483376 KIF23Q02241 960 aaPredicted RBP19.57■□□□□ 0.72
COL2A1-206ENST00000483376 PALD1Q9ULE6 856 aa19.57■□□□□ 0.72
COL2A1-206ENST00000483376 SIPA1L1O43166 1804 aa19.57■□□□□ 0.72
COL2A1-206ENST00000483376 TM4SF4P48230 202 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 PPATQ06203 517 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 GRM1Q13255 1194 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 SCYL3Q8IZE3 742 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 SDR42E1Q8WUS8 393 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 ZKSCAN4Q969J2 545 aaPredicted RBP19.56■□□□□ 0.72
COL2A1-206ENST00000483376 OPTNQ96CV9 577 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 ZIC5Q96T25 663 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL2A1-206ENST00000483376 GINM1Q9NU53 330 aa19.56■□□□□ 0.72
COL2A1-206ENST00000483376 TESPA1A2RU30 521 aaPredicted RBP19.55■□□□□ 0.72
COL2A1-206ENST00000483376 MANSC4A6NHS7 340 aaPredicted RBP19.55■□□□□ 0.72
COL2A1-206ENST00000483376 GPAA1O43292 621 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 GJA5P36382 358 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 SREBF2Q12772 1141 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 DNAJC18Q9H819 358 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 ELP3Q9H9T3 547 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 SERPINB13Q9UIV8 391 aa19.55■□□□□ 0.72
COL2A1-206ENST00000483376 NAV1Q8NEY1 1877 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 GABPAQ06546 454 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 PPIL2Q13356 520 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 TATDN1Q6P1N9 297 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 DDRGK1Q96HY6 314 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 HELLSQ9NRZ9 838 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 SAGE1Q9NXZ1 904 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
COL2A1-206ENST00000483376 SLC4A4Q9Y6R1 1079 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 MYH1P12882 1939 aa19.54■□□□□ 0.72
COL2A1-206ENST00000483376 TRIM6-TRIM34B2RNG4 842 aa19.53■□□□□ 0.72
COL2A1-206ENST00000483376 PRKAB2O43741 272 aa19.53■□□□□ 0.72
COL2A1-206ENST00000483376 HSPA1AP0DMV8 641 aaKnown RBP19.53■□□□□ 0.72
COL2A1-206ENST00000483376 HSPA1BP0DMV9 641 aaKnown RBP19.53■□□□□ 0.72
COL2A1-206ENST00000483376 CAP2P40123 477 aa19.53■□□□□ 0.72
COL2A1-206ENST00000483376 TTC22Q5TAA0 569 aa19.53■□□□□ 0.72
COL2A1-206ENST00000483376 CCDC136Q96JN2 1154 aa19.53■□□□□ 0.72
COL2A1-206ENST00000483376 GSG1L2A8MUP6 293 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 M0R2C6 588 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 HIP1O00291 1037 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 POLR3DP05423 398 aaPredicted RBP19.52■□□□□ 0.72
COL2A1-206ENST00000483376 SBK1Q52WX2 424 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 CRACR2BQ8N4Y2 399 aaPredicted RBP19.52■□□□□ 0.72
COL2A1-206ENST00000483376 MS4A4AQ96JQ5 239 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 CFHR5Q9BXR6 569 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 PICK1Q9NRD5 415 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 ARPP21Q9UBL0 812 aaPredicted RBP19.52■□□□□ 0.72
COL2A1-206ENST00000483376 KCNH4Q9UQ05 1017 aa19.52■□□□□ 0.72
COL2A1-206ENST00000483376 PATL2C9JE40 543 aaKnown RBP19.51■□□□□ 0.71
COL2A1-206ENST00000483376 SLURP2P0DP57 97 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 GSPT1P15170 499 aaKnown RBP19.51■□□□□ 0.71
COL2A1-206ENST00000483376 PTPRAP18433 802 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 PLCD1P51178 756 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 GTF2A2P52657 109 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 C12orf60Q5U649 245 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 AMOTL1Q8IY63 956 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 RILPL2Q969X0 211 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 OTUD5Q96G74 571 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 BEGAINQ9BUH8 593 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 TRIM34Q9BYJ4 488 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 SWAP70Q9UH65 585 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 DOCK1Q14185 1865 aa19.51■□□□□ 0.71
COL2A1-206ENST00000483376 FAM196BA6NMK8 535 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 CXCL11O14625 94 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 IRF6O14896 467 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 ASNSP08243 561 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 SDSP20132 328 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
COL2A1-206ENST00000483376 SEC62Q99442 399 aaKnown RBP19.5■□□□□ 0.71
COL2A1-206ENST00000483376 ZCCHC17Q9NP64 241 aaKnown RBP19.5■□□□□ 0.71
COL2A1-206ENST00000483376 ROBO3Q96MS0 1386 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 USP17L12C9JPN9 530 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 USP17L21D6R901 530 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 ALDH1A1P00352 501 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 SNAPC2Q13487 334 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 RRP1BQ14684 758 aaKnown RBP19.49■□□□□ 0.71
COL2A1-206ENST00000483376 MCMDC2Q4G0Z9 681 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 CTR9Q6PD62 1173 aa19.49■□□□□ 0.71
COL2A1-206ENST00000483376 EPB41L4AQ9HCS5 686 aaPredicted RBP19.49■□□□□ 0.71
COL2A1-206ENST00000483376 SHMT1P34896 483 aa19.48■□□□□ 0.71
COL2A1-206ENST00000483376 NACAP1Q9BZK3 213 aa19.48■□□□□ 0.71
COL2A1-206ENST00000483376 AFG3L2Q9Y4W6 797 aa19.48■□□□□ 0.71
COL2A1-206ENST00000483376 A0A0D9SFI3 127 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 FOXN1O15353 648 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 CETPP11597 493 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 CTCFP49711 727 aaPredicted RBP19.47■□□□□ 0.71
COL2A1-206ENST00000483376 MFAP1P55081 439 aaKnown RBP19.47■□□□□ 0.71
COL2A1-206ENST00000483376 MKRN3Q13064 507 aaKnown RBP19.47■□□□□ 0.71
COL2A1-206ENST00000483376 ALX1Q15699 326 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 NOM1Q5C9Z4 860 aaKnown RBP19.47■□□□□ 0.71
COL2A1-206ENST00000483376 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 IFNL1Q8IU54 200 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 IFNL3Q8IZI9 196 aa19.47■□□□□ 0.71
COL2A1-206ENST00000483376 FAM227BQ96M60 508 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms