RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 INHAP05111 366 aa17.17■□□□□ 0.34
VARS-226ENST00000483275 GJB1P08034 283 aa17.17■□□□□ 0.34
VARS-226ENST00000483275 SHROOM1Q2M3G4 852 aaPredicted RBP17.17■□□□□ 0.34
VARS-226ENST00000483275 SLAIN1Q8ND83 568 aa17.17■□□□□ 0.34
VARS-226ENST00000483275 SH3RF3Q8TEJ3 882 aaPredicted RBP17.17■□□□□ 0.34
VARS-226ENST00000483275 AGTPBP1Q9UPW5 1226 aa17.17■□□□□ 0.34
VARS-226ENST00000483275 FARP2O94887 1054 aaPredicted RBP17.16■□□□□ 0.34
VARS-226ENST00000483275 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
VARS-226ENST00000483275 HMGCS2P54868 508 aa17.16■□□□□ 0.34
VARS-226ENST00000483275 UBXN2AP68543 259 aa17.16■□□□□ 0.34
VARS-226ENST00000483275 UBE2Q1Q7Z7E8 422 aa17.16■□□□□ 0.34
VARS-226ENST00000483275 TEX11Q8IYF3 940 aa17.16■□□□□ 0.34
VARS-226ENST00000483275 U2AF1L4Q8WU68 220 aaKnown RBP17.16■□□□□ 0.34
VARS-226ENST00000483275 OSBPL5Q9H0X9 879 aaPredicted RBP17.16■□□□□ 0.34
VARS-226ENST00000483275 ZBTB22O15209 634 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 PEX10O60683 326 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 GNAI2P04899 355 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 SPP2Q13103 211 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 C1orf115Q9H7X2 142 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 SLC45A1Q9Y2W3 748 aa17.15■□□□□ 0.34
VARS-226ENST00000483275 COL2A1P02458 1487 aaPredicted RBP17.15■□□□□ 0.34
VARS-226ENST00000483275 GSTO1P78417 241 aa17.14■□□□□ 0.33
VARS-226ENST00000483275 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
VARS-226ENST00000483275 LRP2BPQ9P2M1 347 aa17.14■□□□□ 0.33
VARS-226ENST00000483275 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
VARS-226ENST00000483275 JAG1P78504 1218 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 G3BP1Q13283 466 aaKnown RBP eCLIP17.13■□□□□ 0.335e-7■■■■■ 36.4
VARS-226ENST00000483275 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 DBNDD2Q9BQY9 259 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
VARS-226ENST00000483275 MYH1P12882 1939 aa17.13■□□□□ 0.33
VARS-226ENST00000483275 LAMA3Q16787 3333 aa17.12■□□□□ 0.33
VARS-226ENST00000483275 TBC1D12O60347 775 aa17.12■□□□□ 0.33
VARS-226ENST00000483275 LDHCP07864 332 aa17.12■□□□□ 0.33
VARS-226ENST00000483275 MAPKAPK5Q8IW41 473 aa17.12■□□□□ 0.33
VARS-226ENST00000483275 ZNF280CQ8ND82 737 aa17.12■□□□□ 0.33
VARS-226ENST00000483275 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
VARS-226ENST00000483275 SGPL1O95470 568 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 CAP2P40123 477 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 TRIM32Q13049 653 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 MTMR2Q13614 643 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 PROCA1Q8NCQ7 364 aaPredicted RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 DIS3LQ8TF46 1054 aaKnown RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 SAP30BPQ9UHR5 308 aaKnown RBP17.11■□□□□ 0.33
VARS-226ENST00000483275 PNMA3Q9UL41 463 aa17.11■□□□□ 0.33
VARS-226ENST00000483275 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
VARS-226ENST00000483275 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
VARS-226ENST00000483275 GDF11O95390 407 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 TFRCP02786 760 aaKnown RBP17.1■□□□□ 0.33
VARS-226ENST00000483275 IRF5Q13568 498 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 FAM110CQ1W6H9 321 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 TNNI3KQ59H18 835 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
VARS-226ENST00000483275 TGFBRAP1Q8WUH2 860 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 COA7Q96BR5 231 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 FPGT-TNNI3KV9GXZ4 949 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 FLT1P17948 1338 aa17.1■□□□□ 0.33
VARS-226ENST00000483275 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
VARS-226ENST00000483275 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
VARS-226ENST00000483275 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
VARS-226ENST00000483275 UQCRFS1P1P0C7P4 283 aa17.09■□□□□ 0.33
VARS-226ENST00000483275 NOL10Q9BSC4 688 aaKnown RBP17.09■□□□□ 0.33
VARS-226ENST00000483275 PIH1D3Q9NQM4 214 aaKnown RBP17.09■□□□□ 0.33
VARS-226ENST00000483275 PAK6Q9NQU5 681 aaPredicted RBP17.09■□□□□ 0.33
VARS-226ENST00000483275 PALD1Q9ULE6 856 aa17.09■□□□□ 0.33
VARS-226ENST00000483275 NDUFB9Q9Y6M9 179 aa17.09■□□□□ 0.33
VARS-226ENST00000483275 ZBTB7BO15156 539 aaPredicted RBP17.08■□□□□ 0.32
VARS-226ENST00000483275 ZAP70P43403 619 aa17.08■□□□□ 0.32
VARS-226ENST00000483275 DYNLL1P63167 89 aaKnown RBP17.08■□□□□ 0.32
VARS-226ENST00000483275 POLA2Q14181 598 aa17.08■□□□□ 0.32
VARS-226ENST00000483275 PXYLP1Q8TE99 480 aa17.08■□□□□ 0.32
VARS-226ENST00000483275 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.08■□□□□ 0.325e-6■■■■■ 30
VARS-226ENST00000483275 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
VARS-226ENST00000483275 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
VARS-226ENST00000483275 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
VARS-226ENST00000483275 FRMPD3Q5JV73 1810 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 EVI5O60447 810 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 SURF6O75683 361 aaKnown RBP17.06■□□□□ 0.32
VARS-226ENST00000483275 RLBP1P12271 317 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 IRX3P78415 501 aaPredicted RBP17.06■□□□□ 0.32
VARS-226ENST00000483275 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 CRACR2BQ8N4Y2 399 aaPredicted RBP17.06■□□□□ 0.32
VARS-226ENST00000483275 PRO3102Q9H379 93 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 TXNRD2Q9NNW7 524 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
VARS-226ENST00000483275 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
VARS-226ENST00000483275 MAP4K4O95819 1239 aaPredicted RBP17.05■□□□□ 0.32
VARS-226ENST00000483275 HMGCRP04035 888 aa17.05■□□□□ 0.32
VARS-226ENST00000483275 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms