RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 PRDM1O75626 825 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 BAG3O95817 575 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 MBD3O95983 291 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 TGFB2P61812 414 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 PCDHAC2Q9Y5I4 1007 aa12.15□□□□□ -0.46
APTX-225ENST00000482687 CDK11BP21127 795 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 GJB2P29033 226 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 PTGER2P43116 358 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 ILDR2Q71H61 639 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 ZSWIM5Q9P217 1185 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 ZDHHC9Q9Y397 364 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 DAGLAQ9Y4D2 1042 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 GOLGB1Q14789 3259 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 COL4A5P29400 1685 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 GPR75-ASB3A0A0A6YYF3 556 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 YDJCA8MPS7 323 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 MYH1P12882 1939 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 PPP4CP60510 307 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 SCRN1Q12765 414 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 SYCP1Q15431 976 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 DALRD3Q5D0E6 543 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 DNTTIP2Q5QJE6 756 aaKnown RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 RTKN2Q8IZC4 609 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
APTX-225ENST00000482687 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
APTX-225ENST00000482687 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 USP17L3A6NCW0 530 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 USP17L4A6NCW7 530 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 JAK2O60674 1132 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.47
APTX-225ENST00000482687 DACT2Q5SW24 774 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 USP17L1Q7RTZ2 530 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 NLGN2Q8NFZ4 835 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 AGXT2Q9BYV1 514 aa12.13□□□□□ -0.47
APTX-225ENST00000482687 GAKO14976 1311 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 CCDC66A2RUB6 948 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 SH2B2O14492 632 aaPredicted RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 PFKFB2O60825 505 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 RAD17O75943 681 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 RHBDL3P58872 404 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 FAM193AP78312 1265 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 PICALMQ13492 652 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 TMEM67Q5HYA8 995 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 GIMAP6Q6P9H5 292 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 GPT2Q8TD30 523 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 KRT23Q9C075 422 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 BCS1LQ9Y276 419 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 FOCADQ5VW36 1801 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 ECM29Q5VYK3 1845 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 IFIT3O14879 490 aaKnown RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 RXRAP19793 462 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-225ENST00000482687 FOSBP53539 338 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 FOXD4L6Q3SYB3 417 aaPredicted RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 STRIP1Q5VSL9 837 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 FOXD4L3Q6VB84 417 aaPredicted RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 FAM184AQ8NB25 1140 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 DDX11Q96FC9 970 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
APTX-225ENST00000482687 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
APTX-225ENST00000482687 PSME4Q14997 1843 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 GOLGA8BA8MQT2 603 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 POLR3DP05423 398 aaPredicted RBP12.11□□□□□ -0.47
APTX-225ENST00000482687 CRKP46108 304 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 PLCD1P51178 756 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
APTX-225ENST00000482687 NFXL1Q6ZNB6 911 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
APTX-225ENST00000482687 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 IGDCC4Q8TDY8 1250 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 PSMD1Q99460 953 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 MYL10Q9BUA6 226 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 TSPY26PQ9H489 355 aa12.11□□□□□ -0.47
APTX-225ENST00000482687 RNF41Q9H4P4 317 aaPredicted RBP12.11□□□□□ -0.47
APTX-225ENST00000482687 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms