RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CXCL11O14625 94 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 USP5P45974 858 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN1-213ENST00000482192 ECHDC1Q9NTX5 307 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 PALD1Q9ULE6 856 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 ZHX2Q9Y6X8 837 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
HMGN1-213ENST00000482192 DOCK1Q14185 1865 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 MYO5AQ9Y4I1 1855 aaKnown RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 MAGEB6P1A0A0J9YX57 407 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 HLA-DOAP06340 250 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 ANKRD23Q86SG2 305 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 CRACR2BQ8N4Y2 399 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 EDC3Q96F86 508 aaKnown RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 ERO1AQ96HE7 468 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 SAP30BPQ9UHR5 308 aaKnown RBP14.4□□□□□ -0.1
HMGN1-213ENST00000482192 FOCADQ5VW36 1801 aa14.4□□□□□ -0.1
HMGN1-213ENST00000482192 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
HMGN1-213ENST00000482192 CAP2P40123 477 aa14.39□□□□□ -0.11
HMGN1-213ENST00000482192 SP3Q02447 781 aa14.39□□□□□ -0.11
HMGN1-213ENST00000482192 AAMPQ13685 434 aa14.39□□□□□ -0.11
HMGN1-213ENST00000482192 METTL16Q86W50 562 aaKnown RBP14.39□□□□□ -0.11
HMGN1-213ENST00000482192 AFG3L2Q9Y4W6 797 aa14.39□□□□□ -0.11
HMGN1-213ENST00000482192 A0A0G2JLL6 359 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-213ENST00000482192 TCRBV5S4A2TA0A5A2 114 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 PDHXO00330 501 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 TLR2O60603 784 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 MOGSQ13724 837 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
HMGN1-213ENST00000482192 PRRT2Q7Z6L0 340 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-213ENST00000482192 TBC1D2Q9BYX2 928 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
HMGN1-213ENST00000482192 DNAJC18Q9H819 358 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 CDK5RAP2Q96SN8 1893 aa14.38□□□□□ -0.11
HMGN1-213ENST00000482192 SIPA1L1O43166 1804 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 TRIM75PA6NK02 468 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 ADD2P35612 726 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 ZSCAN25Q6NSZ9 544 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 FBXO46Q6PJ61 603 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-213ENST00000482192 TTC6Q86TZ1 520 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 PARK7Q99497 189 aaKnown RBP14.37□□□□□ -0.11
HMGN1-213ENST00000482192 EHD4Q9H223 541 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
HMGN1-213ENST00000482192 TRIM17Q9Y577 477 aa14.37□□□□□ -0.11
HMGN1-213ENST00000482192 ASNSP08243 561 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 HDAC1Q13547 482 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-213ENST00000482192 RRP1BQ14684 758 aaKnown RBP14.36□□□□□ -0.11
HMGN1-213ENST00000482192 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 UBE3CQ15386 1083 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 OTOP1Q7RTM1 612 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-213ENST00000482192 LCORLQ8N3X6 602 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 ZNF280CQ8ND82 737 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 CD99L2Q8TCZ2 262 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 AS3MTQ9HBK9 375 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 GINM1Q9NU53 330 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 ZBTB47Q9UFB7 747 aaPredicted RBP14.36□□□□□ -0.11
HMGN1-213ENST00000482192 SERPINB13Q9UIV8 391 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 HPS5Q9UPZ3 1129 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 TTC41PQ6P2S7 1318 aa14.36□□□□□ -0.11
HMGN1-213ENST00000482192 USP17L5A8MUK1 530 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 MBD4O95243 580 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 SPP2Q13103 211 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 TSHZ3Q63HK5 1081 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 GPAT2Q6NUI2 795 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 GADL1Q6ZQY3 521 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 GCC1Q96CN9 775 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 SLC45A1Q9Y2W3 748 aa14.35□□□□□ -0.11
HMGN1-213ENST00000482192 DDX60LQ5H9U9 1706 aaKnown RBP14.35□□□□□ -0.11
HMGN1-213ENST00000482192 ERC2O15083 957 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 POLR3DP05423 398 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-213ENST00000482192 TATDN1Q6P1N9 297 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 ARMT1Q9H993 441 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 ZBTB21Q9ULJ3 1066 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 AGTPBP1Q9UPW5 1226 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 ADGRA2Q96PE1 1338 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 PHIPQ8WWQ0 1821 aa14.34□□□□□ -0.11
HMGN1-213ENST00000482192 GDF11O95390 407 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 CYP2C8P10632 490 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 MX1P20591 662 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 LACTBP83111 547 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-213ENST00000482192 KIF22Q14807 665 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 C17orf99Q6UX52 265 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-213ENST00000482192 SDR42E1Q8WUS8 393 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 WDR18Q9BV38 432 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 DCP1AQ9NPI6 582 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-213ENST00000482192 ATP8A2Q9NTI2 1148 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 CPA4Q9UI42 421 aa14.33□□□□□ -0.12
HMGN1-213ENST00000482192 ATAD5Q96QE3 1844 aa14.32□□□□□ -0.12
HMGN1-213ENST00000482192 NAV1Q8NEY1 1877 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms