RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 GINM1Q9NU53 330 aa19.66■□□□□ 0.74
CCDC78-212ENST00000482152 PALD1Q9ULE6 856 aa19.66■□□□□ 0.74
CCDC78-212ENST00000482152 TESPA1A2RU30 521 aaPredicted RBP19.65■□□□□ 0.74
CCDC78-212ENST00000482152 MBD4O95243 580 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 NEFLP07196 543 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 GNAT2P19087 354 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 INPP5BP32019 993 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 PPIL2Q13356 520 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 OTUD7BQ6GQQ9 843 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 SCYL3Q8IZE3 742 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 CRACR2BQ8N4Y2 399 aaPredicted RBP19.65■□□□□ 0.74
CCDC78-212ENST00000482152 TBC1D2Q9BYX2 928 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 PUS7LQ9H0K6 701 aaKnown RBP19.65■□□□□ 0.74
CCDC78-212ENST00000482152 ARMT1Q9H993 441 aa19.65■□□□□ 0.74
CCDC78-212ENST00000482152 AK9Q5TCS8 1911 aa19.64■□□□□ 0.74
CCDC78-212ENST00000482152 GIMAP6Q6P9H5 292 aa19.64■□□□□ 0.73
CCDC78-212ENST00000482152 STRBPQ96SI9 672 aaKnown RBP19.64■□□□□ 0.73
CCDC78-212ENST00000482152 DCP1AQ9NPI6 582 aaPredicted RBP19.64■□□□□ 0.73
CCDC78-212ENST00000482152 SAP30BPQ9UHR5 308 aaKnown RBP19.64■□□□□ 0.73
CCDC78-212ENST00000482152 POLR3DP05423 398 aaPredicted RBP19.63■□□□□ 0.73
CCDC78-212ENST00000482152 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
CCDC78-212ENST00000482152 AMOTL1Q8IY63 956 aa19.63■□□□□ 0.73
CCDC78-212ENST00000482152 OSBP2Q969R2 916 aa19.63■□□□□ 0.73
CCDC78-212ENST00000482152 OTUD5Q96G74 571 aa19.63■□□□□ 0.73
CCDC78-212ENST00000482152 MCM9Q9NXL9 1143 aa19.63■□□□□ 0.73
CCDC78-212ENST00000482152 SERPINB13Q9UIV8 391 aa19.63■□□□□ 0.73
CCDC78-212ENST00000482152 CXCL11O14625 94 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 FOXN1O15353 648 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 GJA5P36382 358 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 CAP2P40123 477 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 SNAPC2Q13487 334 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 SLFNL1Q499Z3 407 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 CENPQQ7L2Z9 268 aaPredicted RBP19.62■□□□□ 0.73
CCDC78-212ENST00000482152 MS4A4AQ96JQ5 239 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 RNF186Q9NXI6 227 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.62■□□□□ 0.73
CCDC78-212ENST00000482152 SLC4A4Q9Y6R1 1079 aa19.62■□□□□ 0.73
CCDC78-212ENST00000482152 FOCADQ5VW36 1801 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 TRIM6-TRIM34B2RNG4 842 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 CETPP11597 493 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 PTPRAP18433 802 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 ZMYM1Q5SVZ6 1142 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 SDR42E1Q8WUS8 393 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 CFHR5Q9BXR6 569 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 PRDM10Q9NQV6 1147 aa19.61■□□□□ 0.73
CCDC78-212ENST00000482152 IRF6O14896 467 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 CHGBP05060 677 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 ERICH6BQ5W0A0 696 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 TATDN1Q6P1N9 297 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 ZCCHC17Q9NP64 241 aaKnown RBP19.6■□□□□ 0.73
CCDC78-212ENST00000482152 HELLSQ9NRZ9 838 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 KCNH4Q9UQ05 1017 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 PCNTO95613 3336 aa19.6■□□□□ 0.73
CCDC78-212ENST00000482152 PATL2C9JE40 543 aaKnown RBP19.59■□□□□ 0.73
CCDC78-212ENST00000482152 HIP1O00291 1037 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 GPAA1O43292 621 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 PRKAB2O43741 272 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 TRPA1O75762 1119 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 ASNSP08243 561 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 PLCD1P51178 756 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 CNKSR2Q8WXI2 1034 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 RILPL2Q969X0 211 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 NACAP1Q9BZK3 213 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 SWAP70Q9UH65 585 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 ZHX2Q9Y6X8 837 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 MYH7P12883 1935 aa19.59■□□□□ 0.73
CCDC78-212ENST00000482152 OTOFQ9HC10 1997 aa19.58■□□□□ 0.73
CCDC78-212ENST00000482152 HSPA8P11142 646 aaKnown RBP19.58■□□□□ 0.72
CCDC78-212ENST00000482152 GABPAQ06546 454 aa19.58■□□□□ 0.72
CCDC78-212ENST00000482152 SBK1Q52WX2 424 aa19.58■□□□□ 0.72
CCDC78-212ENST00000482152 NOM1Q5C9Z4 860 aaKnown RBP19.58■□□□□ 0.72
CCDC78-212ENST00000482152 C12orf60Q5U649 245 aa19.58■□□□□ 0.72
CCDC78-212ENST00000482152 ARPP21Q9UBL0 812 aaPredicted RBP19.58■□□□□ 0.72
CCDC78-212ENST00000482152 AFG3L2Q9Y4W6 797 aa19.58■□□□□ 0.72
CCDC78-212ENST00000482152 CDK5RAP2Q96SN8 1893 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 CCL15-CCL14A0A0B4J2E2 113 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 FAM196BA6NMK8 535 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 USP17L5A8MUK1 530 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 GSG1L2A8MUP6 293 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 PDE4AP27815 886 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 CCL15Q16663 113 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 MCMDC2Q4G0Z9 681 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 FASTKD5Q7L8L6 764 aaKnown RBP19.57■□□□□ 0.72
CCDC78-212ENST00000482152 DNAJC18Q9H819 358 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 AS3MTQ9HBK9 375 aa19.57■□□□□ 0.72
CCDC78-212ENST00000482152 USP17L12C9JPN9 530 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 USP17L21D6R901 530 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 M0R2C6 588 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 SLURP2P0DP57 97 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 LBX1P52954 281 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 MFAP1P55081 439 aaKnown RBP19.56■□□□□ 0.72
CCDC78-212ENST00000482152 CERKLQ49MI3 558 aaPredicted RBP19.56■□□□□ 0.72
CCDC78-212ENST00000482152 BRI3BPQ8WY22 251 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 CCDC136Q96JN2 1154 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 WDR18Q9BV38 432 aa19.56■□□□□ 0.72
CCDC78-212ENST00000482152 APPP05067 770 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 SDSP20132 328 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 CTR9Q6PD62 1173 aa19.55■□□□□ 0.72
CCDC78-212ENST00000482152 ZNF280CQ8ND82 737 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms