RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 EN2P19622 333 aaPredicted RBP22.71■■□□□ 1.23
CLK1-211ENST00000481641 DYNLL1P63167 89 aaKnown RBP22.71■■□□□ 1.23
CLK1-211ENST00000481641 FASTKD5Q7L8L6 764 aaKnown RBP22.71■■□□□ 1.23
CLK1-211ENST00000481641 MAPKAPK5Q8IW41 473 aa22.71■■□□□ 1.23
CLK1-211ENST00000481641 COG6Q9Y2V7 657 aa22.71■■□□□ 1.23
CLK1-211ENST00000481641 COL2A1P02458 1487 aaPredicted RBP22.71■■□□□ 1.23
CLK1-211ENST00000481641 BRCA2P51587 3418 aa22.7■■□□□ 1.23
CLK1-211ENST00000481641 PPP4CP60510 307 aa22.7■■□□□ 1.22
CLK1-211ENST00000481641 AACSQ86V21 672 aa22.7■■□□□ 1.22
CLK1-211ENST00000481641 IL1RAPL2Q9NP60 686 aa22.7■■□□□ 1.22
CLK1-211ENST00000481641 CDK5RAP2Q96SN8 1893 aa22.7■■□□□ 1.22
CLK1-211ENST00000481641 SIPA1L1O43166 1804 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 APBB1O00213 710 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 FMNL1O95466 1100 aaPredicted RBP22.69■■□□□ 1.22
CLK1-211ENST00000481641 BCRP11274 1271 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 OSBPP22059 807 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 NBPF11Q86T75 865 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 ANTXR1Q9H6X2 564 aa22.69■■□□□ 1.22
CLK1-211ENST00000481641 MKI67P46013 3256 aaKnown RBP22.69■■□□□ 1.22
CLK1-211ENST00000481641 ATAD5Q96QE3 1844 aa22.68■■□□□ 1.22
CLK1-211ENST00000481641 FLT1P17948 1338 aa22.68■■□□□ 1.22
CLK1-211ENST00000481641 IDH1O75874 414 aaKnown RBP22.68■■□□□ 1.22
CLK1-211ENST00000481641 PLCG2P16885 1265 aa22.68■■□□□ 1.22
CLK1-211ENST00000481641 CYP7A1P22680 504 aa22.68■■□□□ 1.22
CLK1-211ENST00000481641 CAP2P40123 477 aa22.68■■□□□ 1.22
CLK1-211ENST00000481641 RBBP6Q7Z6E9 1792 aaKnown RBP22.68■■□□□ 1.22
CLK1-211ENST00000481641 GNRH1P01148 92 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 MS4A1P11836 297 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 SPP2Q13103 211 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 SLC4A8Q2Y0W8 1093 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 TREML2Q5T2D2 321 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 ERC1Q8IUD2 1116 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 MIGA1Q8NAN2 632 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 RHPN1Q8TCX5 695 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 TMEM106CQ9BVX2 250 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 BCL11AQ9H165 835 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 PI4KBQ9UBF8 816 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 SRRDQ9UH36 339 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 SAP30BPQ9UHR5 308 aaKnown RBP22.67■■□□□ 1.22
CLK1-211ENST00000481641 PALD1Q9ULE6 856 aa22.67■■□□□ 1.22
CLK1-211ENST00000481641 JAG1P78504 1218 aa22.66■■□□□ 1.22
CLK1-211ENST00000481641 SIRT2Q8IXJ6 389 aa22.66■■□□□ 1.22
CLK1-211ENST00000481641 MAGEB6Q8N7X4 407 aa22.66■■□□□ 1.22
CLK1-211ENST00000481641 DNAJC18Q9H819 358 aa22.66■■□□□ 1.22
CLK1-211ENST00000481641 HERC5Q9UII4 1024 aaKnown RBP22.66■■□□□ 1.22
CLK1-211ENST00000481641 FOCADQ5VW36 1801 aa22.66■■□□□ 1.22
CLK1-211ENST00000481641 PRMT2P55345 433 aa22.65■■□□□ 1.22
CLK1-211ENST00000481641 SHROOM1Q2M3G4 852 aaPredicted RBP22.65■■□□□ 1.22
CLK1-211ENST00000481641 DHX36Q9H2U1 1008 aaKnown RBP22.65■■□□□ 1.22
CLK1-211ENST00000481641 ZBTB40Q9NUA8 1239 aa22.65■■□□□ 1.22
CLK1-211ENST00000481641 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
CLK1-211ENST00000481641 AGTPBP1Q9UPW5 1226 aa22.65■■□□□ 1.22
CLK1-211ENST00000481641 SLC45A1Q9Y2W3 748 aa22.65■■□□□ 1.22
CLK1-211ENST00000481641 MGAMO43451 1857 aa22.64■■□□□ 1.22
CLK1-211ENST00000481641 MYPNQ86TC9 1320 aa22.64■■□□□ 1.22
CLK1-211ENST00000481641 HMGCS2P54868 508 aa22.64■■□□□ 1.21
CLK1-211ENST00000481641 PRPF38BQ5VTL8 546 aaKnown RBP22.64■■□□□ 1.21
CLK1-211ENST00000481641 ZNF280CQ8ND82 737 aa22.64■■□□□ 1.21
CLK1-211ENST00000481641 DDX19BQ9UMR2 479 aa22.64■■□□□ 1.21
CLK1-211ENST00000481641 USP17L5A8MUK1 530 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 HOXD10P28358 340 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 FCGRTP55899 365 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 PRKCZQ05513 592 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 MTFR1Q15390 333 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 HSP90AB4PQ58FF6 505 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 RPAP2Q8IXW5 612 aaPredicted RBP22.63■■□□□ 1.21
CLK1-211ENST00000481641 RAET1EQ8TD07 263 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 SMCR8Q8TEV9 937 aaPredicted RBP22.63■■□□□ 1.21
CLK1-211ENST00000481641 GABRQQ9UN88 632 aa22.63■■□□□ 1.21
CLK1-211ENST00000481641 GDF11O95390 407 aa22.62■■□□□ 1.21
CLK1-211ENST00000481641 C20orf194Q5TEA3 1177 aa22.62■■□□□ 1.21
CLK1-211ENST00000481641 CRACR2BQ8N4Y2 399 aaPredicted RBP22.62■■□□□ 1.21
CLK1-211ENST00000481641 IGSF3O75054 1194 aa22.61■■□□□ 1.21
CLK1-211ENST00000481641 METTL16Q86W50 562 aaKnown RBP22.61■■□□□ 1.21
CLK1-211ENST00000481641 FOXP4Q8IVH2 680 aaPredicted RBP22.61■■□□□ 1.21
CLK1-211ENST00000481641 ANKRD13CQ8N6S4 541 aa22.61■■□□□ 1.21
CLK1-211ENST00000481641 PROCA1Q8NCQ7 364 aaPredicted RBP22.61■■□□□ 1.21
CLK1-211ENST00000481641 TRIM34Q9BYJ4 488 aa22.61■■□□□ 1.21
CLK1-211ENST00000481641 GRK4P32298 578 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 USP5P45974 858 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 MAP3K12Q12852 859 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 CLASRPQ8N2M8 674 aaKnown RBP22.6■■□□□ 1.21
CLK1-211ENST00000481641 KIF1BPQ96EK5 621 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 MYH1P12882 1939 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 LOC285556D6RIA3 1793 aa22.6■■□□□ 1.21
CLK1-211ENST00000481641 HMMRO75330 724 aa22.59■■□□□ 1.21
CLK1-211ENST00000481641 TBC1D2Q9BYX2 928 aa22.59■■□□□ 1.21
CLK1-211ENST00000481641 AS3MTQ9HBK9 375 aa22.59■■□□□ 1.21
CLK1-211ENST00000481641 HLA-DOAP06340 250 aa22.58■■□□□ 1.21
CLK1-211ENST00000481641 MTMR2Q13614 643 aa22.58■■□□□ 1.21
CLK1-211ENST00000481641 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
CLK1-211ENST00000481641 DNAJC2Q99543 621 aaKnown RBP22.58■■□□□ 1.21
CLK1-211ENST00000481641 WDR18Q9BV38 432 aa22.58■■□□□ 1.21
CLK1-211ENST00000481641 BIN2Q9UBW5 565 aaPredicted RBP22.58■■□□□ 1.21
CLK1-211ENST00000481641 PNMA3Q9UL41 463 aa22.58■■□□□ 1.21
CLK1-211ENST00000481641 DOCK3Q8IZD9 2030 aa22.58■■□□□ 1.2
CLK1-211ENST00000481641 ASNSP08243 561 aa22.57■■□□□ 1.2
CLK1-211ENST00000481641 IFIT2P09913 472 aaKnown RBP22.57■■□□□ 1.2
CLK1-211ENST00000481641 EDC3Q96F86 508 aaKnown RBP22.57■■□□□ 1.2
CLK1-211ENST00000481641 ASCC2Q9H1I8 757 aaPredicted RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms