RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 BTN2A2Q8WVV5 523 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 ESR2Q92731 530 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
TRIM27-205ENST00000481474 CCDC68Q9H2F9 335 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 SYKP43405 635 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 LONRF3Q496Y0 759 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 TRIM50Q86XT4 487 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 ZCWPW1Q9H0M4 648 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
TRIM27-205ENST00000481474 ZNF449Q6P9G9 518 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 SND1Q7KZF4 910 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM27-205ENST00000481474 AFAP1L2Q8N4X5 818 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 DDX12PQ92771 950 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 OTUD7BQ6GQQ9 843 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 CALCOCO1Q9P1Z2 691 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 TRIM35Q9UPQ4 493 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 DPYSL4O14531 572 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
TRIM27-205ENST00000481474 KIFAP3Q92845 792 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 DOLKQ9UPQ8 538 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 SMAP1Q8IYB5 467 aaPredicted RBP12.88□□□□□ -0.35
TRIM27-205ENST00000481474 PSMB7Q99436 277 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 TNFAIP3P21580 790 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 ZNF174Q15697 407 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 CTAGE3PQ8IX95 158 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 TBC1D8O95759 1140 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 KAZNQ674X7 775 aa12.88□□□□□ -0.35
TRIM27-205ENST00000481474 A0A1B0GUL7 405 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 M0R2C6 588 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 TRAF5O00463 557 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 BAG5Q9UL15 447 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 RHOXF2BP0C7M4 288 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 HCLS1P14317 486 aaPredicted RBP12.87□□□□□ -0.35
TRIM27-205ENST00000481474 MYCT1Q8N699 235 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 RHOXF2Q9BQY4 288 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 EPB41P11171 864 aaKnown RBP12.87□□□□□ -0.35
TRIM27-205ENST00000481474 NEDD9Q14511 834 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 ANKS4BQ8N8V4 417 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 BTG4Q9NY30 223 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 CETN3O15182 167 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 IVLP07476 585 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 ALAS1P13196 640 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 SRGAP1Q7Z6B7 1085 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 PPHLN1Q8NEY8 458 aaKnown RBP12.87□□□□□ -0.35
TRIM27-205ENST00000481474 PDCD6IPQ8WUM4 868 aaKnown RBP12.87□□□□□ -0.35
TRIM27-205ENST00000481474 SCNN1DP51172 638 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 INTS8Q75QN2 995 aaKnown RBP12.87□□□□□ -0.35
TRIM27-205ENST00000481474 SLC4A7Q9Y6M7 1214 aa12.87□□□□□ -0.35
TRIM27-205ENST00000481474 ERBB3P21860 1342 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 ESRRBO95718 433 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 IQCB1Q15051 598 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 HIF1AQ16665 826 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 FAM117BQ6P1L5 589 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 GCNT3O95395 438 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 DLGAP5Q15398 846 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 CTAGE6Q86UF2 777 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 CCDC87Q9NVE4 849 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
TRIM27-205ENST00000481474 DCAF4L1Q3SXM0 396 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 AP5M1Q9H0R1 490 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 SUCLA2Q9P2R7 463 aaPredicted RBP12.86□□□□□ -0.35
TRIM27-205ENST00000481474 TXKP42681 527 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
TRIM27-205ENST00000481474 TPH2Q8IWU9 490 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.351e-9■□□□□ 8.9
TRIM27-205ENST00000481474 ERCC6LQ2NKX8 1250 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 ACCSLQ4AC99 568 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
TRIM27-205ENST00000481474 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
TRIM27-205ENST00000481474 EIF4E1BA6NMX2 242 aaKnown RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 S100BP04271 92 aaPredicted RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 ADCY1Q08828 1119 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 FAM182BQ5T319 152 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 BEND3Q5T5X7 828 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 RAPH1Q70E73 1250 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 C10orf67Q8IYJ2 551 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 MAP3K7O43318 606 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 VPS41P49754 854 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 ECE1P42892 770 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 PI4KAP2A4QPH2 592 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 SPTLC2O15270 562 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 RRP9O43818 475 aaKnown RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 BRD2P25440 801 aaKnown RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 DYMQ7RTS9 669 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 PI4KAP1Q8N8J0 262 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 CFAP36Q96G28 342 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 TTC25Q96NG3 672 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 VWA3AA6NCI4 1184 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 NDUFB5O43674 189 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms