RNA–Protein interactions for RNA: ENST00000481269.1

CSNK2B-208, Transcript of casein kinase 2 beta, human

TSL 2

Gene CSNK2B, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK2B-208	ENST00000481269	EPHB4	P54760	987 aa		13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269	TMEM57	Q8N5G2	664 aa		13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CDC5L	Q99459	802 aa	Known RBP	13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269	MINPP1	Q9UNW1	487 aa		13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CHMP3	Q9Y3E7	222 aa		13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.99	□□□□□ -0.17
CSNK2B-208	ENST00000481269		H7C1W4	665 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	GFRA3	O60609	400 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CCND3	P30281	292 aa	Predicted RBP	13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	INPP5B	P32019	993 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CCDC57	Q2TAC2	916 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	GADL1	Q6ZQY3	521 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	PBX4	Q9BYU1	374 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	XIRP2	A4UGR9	3374 aa		13.98	□□□□□ -0.17
CSNK2B-208	ENST00000481269	TRIM43B	A6NCK2	446 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	PLIN1	O60240	522 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	HMMR	O75330	724 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	DCAF15	Q66K64	600 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	SH3RF1	Q7Z6J0	888 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	HERVK_113	Q902F9	699 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	HOOK2	Q96ED9	719 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CD209	Q9NNX6	404 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CD320	Q9NPF0	282 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	PDLIM7	Q9NR12	457 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	BSDC1	Q9NW68	430 aa	Predicted RBP	13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	GJD2	Q9UKL4	321 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	JAG2	Q9Y219	1238 aa		13.97	□□□□□ -0.17
CSNK2B-208	ENST00000481269	MAST2	Q6P0Q8	1798 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	UTY	O14607	1347 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	IGHMBP2	P38935	993 aa	Known RBP	13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CTSW	P56202	376 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CACNB2	Q08289	660 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	IFIT5	Q13325	482 aa	Known RBP	13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	FASTKD5	Q7L8L6	764 aa	Known RBP	13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	PANK1	Q8TE04	598 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	PLA2G12B	Q9BX93	195 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	ZNF341	Q9BYN7	854 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	LEMD3	Q9Y2U8	911 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	COG6	Q9Y2V7	657 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	ECM29	Q5VYK3	1845 aa		13.96	□□□□□ -0.17
CSNK2B-208	ENST00000481269	CFAP54	Q96N23	3096 aa		13.96	□□□□□ -0.18
CSNK2B-208	ENST00000481269	MYH3	P11055	1940 aa		13.96	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ANKRD18B	A2A2Z9	1011 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	GRXCR1	A8MXD5	290 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	CXCL11	O14625	94 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ALAD	P13716	330 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	TRIM60	Q495X7	471 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	MIGA2	Q7L4E1	593 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	MPHOSPH8	Q99549	860 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	USP44	Q9H0E7	712 aa		13.95	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ZKSCAN1	P17029	563 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK2B-208	ENST00000481269	KCNJ4	P48050	445 aa		13.94	□□□□□ -0.18
CSNK2B-208	ENST00000481269	FAM110C	Q1W6H9	321 aa		13.94	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK2B-208	ENST00000481269	COG5	Q9UP83	839 aa		13.94	□□□□□ -0.18
CSNK2B-208	ENST00000481269	BAHCC1	Q9P281	2608 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	CACNB3	P54284	484 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	FPGS	Q05932	587 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SLC39A5	Q6ZMH5	540 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ANKS1A	Q92625	1134 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	MSRA	Q9UJ68	235 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SLC45A1	Q9Y2W3	748 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	DNAH12	Q6ZR08	3092 aa		13.93	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SSTR3	P32745	418 aa	Predicted RBP	13.92	□□□□□ -0.18
CSNK2B-208	ENST00000481269	LMBR1L	Q6UX01	489 aa		13.92	□□□□□ -0.18
CSNK2B-208	ENST00000481269	MEIS3	Q99687	375 aa		13.92	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SERPINA10	Q9UK55	444 aa		13.92	□□□□□ -0.18
CSNK2B-208	ENST00000481269	LRRFIP2	Q9Y608	721 aa	Known RBP	13.92	□□□□□ -0.18
CSNK2B-208	ENST00000481269	WDFY4	Q6ZS81	3184 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269		A0A0G2JLL6	359 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	DNM1L	O00429	736 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	PTPN5	P54829	565 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	FKBP1A	P62942	108 aa	Known RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	KCTD2	Q14681	263 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	HSP90AB4P	Q58FF6	505 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	GJD3	Q8N144	294 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	TTLL11	Q8NHH1	800 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	NKX2-4	Q9H2Z4	354 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	BICC1	Q9H694	974 aa	Known RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	TTF2	Q9UNY4	1162 aa	Known RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	USP34	Q70CQ2	3546 aa		13.91	□□□□□ -0.18
CSNK2B-208	ENST00000481269	LRRC37A2	A6NM11	1700 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SRGAP3	O43295	1099 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	RGS20	O76081	388 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	RLBP1	P12271	317 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	RAG1	P15918	1043 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	ITGA6	P23229	1130 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	OS9	Q13438	667 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	TRMT44	Q8IYL2	757 aa	Known RBP	13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	JARID2	Q92833	1246 aa	Predicted RBP	13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SUCLG2	Q96I99	432 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	SLC28A3	Q9HAS3	691 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	FBXO3	Q9UK99	471 aa		13.9	□□□□□ -0.18
CSNK2B-208	ENST00000481269	CSF1R	P07333	972 aa		13.89	□□□□□ -0.19
CSNK2B-208	ENST00000481269	CASP7	P55210	303 aa		13.89	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms