RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 DHX58Q96C10 678 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 IWS1Q96ST2 819 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 GOLGA8KD6RF30 607 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 STXBP3O00186 592 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 ATP6V1G2O95670 118 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 GNG11P61952 73 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 FOXD4Q12950 439 aaPredicted RBP11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 DHX40Q8IX18 779 aaKnown RBP11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 SPIRE2Q8WWL2 714 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 RUNDC1Q96C34 613 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 NOD2Q9HC29 1040 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 SLC5A4Q9NY91 659 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 CDC23Q9UJX2 597 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
PRPF4B-206ENST00000481109 TIMM44O43615 452 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 MYO1BO43795 1136 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 KIF4AO95239 1232 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 RC3H1Q5TC82 1133 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 NEK9Q8TD19 979 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 COG1Q8WTW3 980 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 TEKT4Q8WW24 435 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 MAIP1Q8WWC4 291 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 ZNF570Q96NI8 536 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 WDR24Q96S15 920 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 UBE2OQ9C0C9 1292 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 TUBA8Q9NY65 449 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 CIDEBQ9UHD4 219 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 PAIP2BQ9ULR5 123 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 A0A1B0GVG6 124 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 ARHGAP6O43182 974 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 DNAJC8O75937 253 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 STIM1Q13586 685 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 LACTB2Q53H82 288 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 TTC6Q86TZ1 520 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 ZBTB8BQ8NAP8 495 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 SCAND2PQ9GZW5 306 aaPredicted RBP11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 GALNT8Q9NY28 637 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 ERCC6L2Q5T890 1561 aa11.64□□□□□ -0.55
PRPF4B-206ENST00000481109 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 PIK3R4Q99570 1358 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 LRRD1A4D1F6 860 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 TPPPO94811 219 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 ANP32DO95626 131 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 SDSP20132 328 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 HSPA4P34932 840 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 HDAC4P56524 1084 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 RNF187Q5TA31 235 aaPredicted RBP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 OLFML1Q6UWY5 402 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 AATFQ9NY61 560 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 MTMR6Q9Y217 621 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 PPP2R2CQ9Y2T4 447 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 LMTK2Q8IWU2 1503 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 ADGRL1O94910 1474 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 EPB41P11171 864 aaKnown RBP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 PDE6BP35913 854 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 KRT72Q14CN4 511 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 SOGA3Q5TF21 947 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 EMC10Q5UCC4 262 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 CCDC121Q6ZUS5 278 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 KLHDC4Q8TBB5 520 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 PPP2R3CQ969Q6 453 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 EPN3Q9H201 632 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 PCMTD2Q9NV79 361 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 ANO10Q9NW15 660 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 DDX25Q9UHL0 483 aaKnown RBP11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 HECW2Q9P2P5 1572 aa11.63□□□□□ -0.55
PRPF4B-206ENST00000481109 TMCC1O94876 653 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 CCNG1P51959 295 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 ZNF394Q53GI3 561 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 GALNT17Q6IS24 598 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 TMED5Q9Y3A6 229 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 NSD2O96028 1365 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 PALM3A6NDB9 673 aaPredicted RBP11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 OTUD6AQ7L8S5 288 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
PRPF4B-206ENST00000481109 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms