RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 CRHR2Q13324 411 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 NOM1Q5C9Z4 860 aaKnown RBP24.39■■□□□ 1.49
VPS36-204ENST00000480923 TSHZ3Q63HK5 1081 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 FAM43AQ8N2R8 423 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 RIOK1Q9BRS2 568 aaKnown RBP24.39■■□□□ 1.49
VPS36-204ENST00000480923 MCOLN1Q9GZU1 580 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 KCNH4Q9UQ05 1017 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 ZHX2Q9Y6X8 837 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 LAMB1P07942 1786 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 FKTNO75072 461 aa24.38■■□□□ 1.49
VPS36-204ENST00000480923 TAF1CQ15572 869 aaPredicted RBP24.38■■□□□ 1.49
VPS36-204ENST00000480923 SLC4A8Q2Y0W8 1093 aa24.38■■□□□ 1.49
VPS36-204ENST00000480923 CRACR2BQ8N4Y2 399 aaPredicted RBP24.38■■□□□ 1.49
VPS36-204ENST00000480923 TCRBV5S4A2TA0A5A2 114 aa24.37■■□□□ 1.49
VPS36-204ENST00000480923 BTBD19C9JJ37 291 aa24.37■■□□□ 1.49
VPS36-204ENST00000480923 ADD2P35612 726 aa24.37■■□□□ 1.49
VPS36-204ENST00000480923 HDAC1Q13547 482 aaPredicted RBP24.37■■□□□ 1.49
VPS36-204ENST00000480923 CTU1Q7Z7A3 348 aaKnown RBP24.37■■□□□ 1.49
VPS36-204ENST00000480923 EXOC6Q8TAG9 804 aa24.37■■□□□ 1.49
VPS36-204ENST00000480923 ABHD8Q96I13 439 aa24.37■■□□□ 1.49
VPS36-204ENST00000480923 CRNKL1Q9BZJ0 848 aaKnown RBP24.37■■□□□ 1.49
VPS36-204ENST00000480923 ANKRD45Q5TZF3 282 aa24.36■■□□□ 1.49
VPS36-204ENST00000480923 FOXP4Q8IVH2 680 aaPredicted RBP24.36■■□□□ 1.49
VPS36-204ENST00000480923 GCC1Q96CN9 775 aa24.36■■□□□ 1.49
VPS36-204ENST00000480923 ZFYVE28Q9HCC9 887 aa24.36■■□□□ 1.49
VPS36-204ENST00000480923 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.36■■□□□ 1.49
VPS36-204ENST00000480923 CXCL11O14625 94 aa24.35■■□□□ 1.49
VPS36-204ENST00000480923 SLFNL1Q499Z3 407 aa24.35■■□□□ 1.49
VPS36-204ENST00000480923 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
VPS36-204ENST00000480923 CAP2P40123 477 aa24.34■■□□□ 1.49
VPS36-204ENST00000480923 CCDC84Q86UT8 332 aaPredicted RBP24.34■■□□□ 1.49
VPS36-204ENST00000480923 LCORLQ8N3X6 602 aa24.34■■□□□ 1.49
VPS36-204ENST00000480923 OTUD7AQ8TE49 926 aaPredicted RBP24.34■■□□□ 1.49
VPS36-204ENST00000480923 ZCCHC17Q9NP64 241 aaKnown RBP24.34■■□□□ 1.49
VPS36-204ENST00000480923 AFG3L2Q9Y4W6 797 aa24.34■■□□□ 1.49
VPS36-204ENST00000480923 TTC41PQ6P2S7 1318 aa24.34■■□□□ 1.49
VPS36-204ENST00000480923 ERC2O15083 957 aa24.33■■□□□ 1.49
VPS36-204ENST00000480923 RRP1BQ14684 758 aaKnown RBP24.33■■□□□ 1.49
VPS36-204ENST00000480923 UBE3CQ15386 1083 aa24.33■■□□□ 1.49
VPS36-204ENST00000480923 ANKRD23Q86SG2 305 aa24.33■■□□□ 1.49
VPS36-204ENST00000480923 RWDD1Q9H446 243 aaPredicted RBP24.33■■□□□ 1.49
VPS36-204ENST00000480923 DNAJC18Q9H819 358 aa24.33■■□□□ 1.49
VPS36-204ENST00000480923 ARMT1Q9H993 441 aa24.33■■□□□ 1.49
VPS36-204ENST00000480923 TRIM75PA6NK02 468 aa24.32■■□□□ 1.48
VPS36-204ENST00000480923 MBD4O95243 580 aa24.32■■□□□ 1.48
VPS36-204ENST00000480923 CHGBP05060 677 aa24.32■■□□□ 1.48
VPS36-204ENST00000480923 TTC6Q86TZ1 520 aa24.32■■□□□ 1.48
VPS36-204ENST00000480923 METTL16Q86W50 562 aaKnown RBP24.32■■□□□ 1.48
VPS36-204ENST00000480923 FOCADQ5VW36 1801 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 A0A0G2JLL6 359 aaPredicted RBP24.31■■□□□ 1.48
VPS36-204ENST00000480923 PDHXO00330 501 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 POLR3DP05423 398 aaPredicted RBP24.31■■□□□ 1.48
VPS36-204ENST00000480923 MX1P20591 662 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 MOGSQ13724 837 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 PRRT2Q7Z6L0 340 aaPredicted RBP24.31■■□□□ 1.48
VPS36-204ENST00000480923 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 SDR42E1Q8WUS8 393 aa24.31■■□□□ 1.48
VPS36-204ENST00000480923 DOCK1Q14185 1865 aa24.3■■□□□ 1.48
VPS36-204ENST00000480923 CDK5RAP2Q96SN8 1893 aa24.3■■□□□ 1.48
VPS36-204ENST00000480923 GADL1Q6ZQY3 521 aa24.3■■□□□ 1.48
VPS36-204ENST00000480923 FASTKD5Q7L8L6 764 aaKnown RBP24.3■■□□□ 1.48
VPS36-204ENST00000480923 MCM9Q9NXL9 1143 aa24.3■■□□□ 1.48
VPS36-204ENST00000480923 SERPINB13Q9UIV8 391 aa24.3■■□□□ 1.48
VPS36-204ENST00000480923 USP17L5A8MUK1 530 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
VPS36-204ENST00000480923 GDF11O95390 407 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 SP3Q02447 781 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 PI4K2BQ8TCG2 481 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 ERO1AQ96HE7 468 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 EHD4Q9H223 541 aa24.29■■□□□ 1.48
VPS36-204ENST00000480923 DCP1AQ9NPI6 582 aaPredicted RBP24.29■■□□□ 1.48
VPS36-204ENST00000480923 SIPA1L1O43166 1804 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 PRKAB2O43741 272 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 ASNSP08243 561 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 SPP2Q13103 211 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 GPAT2Q6NUI2 795 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 CD99L2Q8TCZ2 262 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 TBC1D2Q9BYX2 928 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 AS3MTQ9HBK9 375 aa24.28■■□□□ 1.48
VPS36-204ENST00000480923 CCDC85CA6NKD9 419 aa24.27■■□□□ 1.48
VPS36-204ENST00000480923 TLR2O60603 784 aa24.27■■□□□ 1.48
VPS36-204ENST00000480923 PLCD1P51178 756 aa24.27■■□□□ 1.48
VPS36-204ENST00000480923 PKN2Q16513 984 aaKnown RBP24.27■■□□□ 1.48
VPS36-204ENST00000480923 ZNF280CQ8ND82 737 aa24.27■■□□□ 1.48
VPS36-204ENST00000480923 PUS7LQ9H0K6 701 aaKnown RBP24.27■■□□□ 1.48
VPS36-204ENST00000480923 IRX6P78412 446 aaPredicted RBP24.26■■□□□ 1.47
VPS36-204ENST00000480923 JAG1P78504 1218 aa24.26■■□□□ 1.47
VPS36-204ENST00000480923 PARK7Q99497 189 aaKnown RBP24.26■■□□□ 1.47
VPS36-204ENST00000480923 ATP8A2Q9NTI2 1148 aa24.26■■□□□ 1.47
VPS36-204ENST00000480923 GINM1Q9NU53 330 aa24.26■■□□□ 1.47
VPS36-204ENST00000480923 TRIM17Q9Y577 477 aa24.26■■□□□ 1.47
VPS36-204ENST00000480923 RNF113AO15541 343 aaKnown RBP24.25■■□□□ 1.47
VPS36-204ENST00000480923 IGHDP01880 384 aa24.25■■□□□ 1.47
VPS36-204ENST00000480923 ZFYP08048 801 aaPredicted RBP24.25■■□□□ 1.47
VPS36-204ENST00000480923 SHROOM1Q2M3G4 852 aaPredicted RBP24.25■■□□□ 1.47
VPS36-204ENST00000480923 LRRFIP1Q32MZ4 808 aaKnown RBP24.25■■□□□ 1.47
VPS36-204ENST00000480923 B4GALNT3Q6L9W6 998 aa24.25■■□□□ 1.47
VPS36-204ENST00000480923 DDRGK1Q96HY6 314 aa24.25■■□□□ 1.47
VPS36-204ENST00000480923 ZBTB21Q9ULJ3 1066 aa24.25■■□□□ 1.47
VPS36-204ENST00000480923 SLC4A4Q9Y6R1 1079 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms