RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 BAG3O95817 575 aa18.68■□□□□ 0.58
LIMS3-203ENST00000480744 OSBPP22059 807 aa18.68■□□□□ 0.58
LIMS3-203ENST00000480744 HOXD10P28358 340 aa18.68■□□□□ 0.58
LIMS3-203ENST00000480744 CCDC8Q9H0W5 538 aaPredicted RBP18.68■□□□□ 0.58
LIMS3-203ENST00000480744 TLR7Q9NYK1 1049 aaKnown RBP18.68■□□□□ 0.58
LIMS3-203ENST00000480744 SRRDQ9UH36 339 aa18.68■□□□□ 0.58
LIMS3-203ENST00000480744 CYP2E1P05181 493 aaPredicted RBP18.67■□□□□ 0.58
LIMS3-203ENST00000480744 ZAP70P43403 619 aa18.67■□□□□ 0.58
LIMS3-203ENST00000480744 RAET1EQ8TD07 263 aa18.67■□□□□ 0.58
LIMS3-203ENST00000480744 PANK1Q8TE04 598 aa18.67■□□□□ 0.58
LIMS3-203ENST00000480744 DBNLQ9UJU6 430 aaKnown RBP18.67■□□□□ 0.58
LIMS3-203ENST00000480744 NOP58Q9Y2X3 529 aaKnown RBP18.67■□□□□ 0.58
LIMS3-203ENST00000480744 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
LIMS3-203ENST00000480744 MYH1P12882 1939 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 LOC285556D6RIA3 1793 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 BCRP11274 1271 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 PLCG2P16885 1265 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 FCGRTP55899 365 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
LIMS3-203ENST00000480744 SMCR8Q8TEV9 937 aaPredicted RBP18.66■□□□□ 0.58
LIMS3-203ENST00000480744 PIH1D3Q9NQM4 214 aaKnown RBP18.66■□□□□ 0.58
LIMS3-203ENST00000480744 ADGRA1Q86SQ6 560 aa18.65■□□□□ 0.58
LIMS3-203ENST00000480744 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
LIMS3-203ENST00000480744 EAF2Q96CJ1 260 aaPredicted RBP18.65■□□□□ 0.58
LIMS3-203ENST00000480744 ZNF512BQ96KM6 892 aaPredicted RBP18.65■□□□□ 0.58
LIMS3-203ENST00000480744 EXOC6BQ9Y2D4 811 aa18.65■□□□□ 0.58
LIMS3-203ENST00000480744 SLC45A1Q9Y2W3 748 aa18.65■□□□□ 0.58
LIMS3-203ENST00000480744 SPP2Q13103 211 aa18.64■□□□□ 0.57
LIMS3-203ENST00000480744 TRIM34Q9BYJ4 488 aa18.64■□□□□ 0.57
LIMS3-203ENST00000480744 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
LIMS3-203ENST00000480744 HERC5Q9UII4 1024 aaKnown RBP18.64■□□□□ 0.57
LIMS3-203ENST00000480744 AGTPBP1Q9UPW5 1226 aa18.64■□□□□ 0.57
LIMS3-203ENST00000480744 DOCK3Q8IZD9 2030 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
LIMS3-203ENST00000480744 GRK4P32298 578 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 CAP2P40123 477 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 PPP4CP60510 307 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 PRKCZQ05513 592 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 RRP1BQ14684 758 aaKnown RBP18.63■□□□□ 0.57
LIMS3-203ENST00000480744 TREML2Q5T2D2 321 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 DHX36Q9H2U1 1008 aaKnown RBP18.63■□□□□ 0.57
LIMS3-203ENST00000480744 PI4KBQ9UBF8 816 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 FLT1P17948 1338 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 BRCA2P51587 3418 aa18.63■□□□□ 0.57
LIMS3-203ENST00000480744 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
LIMS3-203ENST00000480744 CYP7A1P22680 504 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 HMGCS2P54868 508 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 DYNLL1P63167 89 aaKnown RBP18.62■□□□□ 0.57
LIMS3-203ENST00000480744 MTFR1Q15390 333 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 AACSQ86V21 672 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 CRACR2BQ8N4Y2 399 aaPredicted RBP18.62■□□□□ 0.57
LIMS3-203ENST00000480744 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
LIMS3-203ENST00000480744 PNMA3Q9UL41 463 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 NDUFB9Q9Y6M9 179 aa18.62■□□□□ 0.57
LIMS3-203ENST00000480744 USP17L5A8MUK1 530 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 PROCA1Q8NCQ7 364 aaPredicted RBP18.61■□□□□ 0.57
LIMS3-203ENST00000480744 TBC1D2Q9BYX2 928 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 AS3MTQ9HBK9 375 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 PALD1Q9ULE6 856 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 GABRQQ9UN88 632 aa18.61■□□□□ 0.57
LIMS3-203ENST00000480744 APBB1O00213 710 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 TNPO2O14787 897 aaKnown RBP18.6■□□□□ 0.57
LIMS3-203ENST00000480744 MS4A1P11836 297 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 MAGEB6Q8N7X4 407 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 MIGA1Q8NAN2 632 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 BCL11AQ9H165 835 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 IL1RAPL2Q9NP60 686 aa18.6■□□□□ 0.57
LIMS3-203ENST00000480744 GDF11O95390 407 aa18.59■□□□□ 0.57
LIMS3-203ENST00000480744 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
LIMS3-203ENST00000480744 UBXN2AP68543 259 aa18.59■□□□□ 0.57
LIMS3-203ENST00000480744 PABPC4Q13310 644 aaKnown RBP eCLIP18.59■□□□□ 0.57
LIMS3-203ENST00000480744 TAOK2Q9UL54 1235 aa18.59■□□□□ 0.57
LIMS3-203ENST00000480744 IGSF3O75054 1194 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 ASNSP08243 561 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 CCL5P13501 91 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 USP5P45974 858 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 FLT3LGP49771 235 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 HSP90AB4PQ58FF6 505 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
LIMS3-203ENST00000480744 SLAIN1Q8ND83 568 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 RNF208Q9H0X6 261 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 ANTXR1Q9H6X2 564 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 DNAJC18Q9H819 358 aa18.58■□□□□ 0.56
LIMS3-203ENST00000480744 NAV1Q8NEY1 1877 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 ADCY3O60266 1144 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 JAG1P78504 1218 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 MAP3K12Q12852 859 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 MTMR2Q13614 643 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 SHROOM1Q2M3G4 852 aaPredicted RBP18.57■□□□□ 0.56
LIMS3-203ENST00000480744 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 GCC1Q96CN9 775 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 COG6Q9Y2V7 657 aa18.57■□□□□ 0.56
LIMS3-203ENST00000480744 ELNP15502 786 aa18.56■□□□□ 0.56
LIMS3-203ENST00000480744 FAM110CQ1W6H9 321 aa18.56■□□□□ 0.56
LIMS3-203ENST00000480744 SH3D19Q5HYK7 790 aa18.56■□□□□ 0.56
LIMS3-203ENST00000480744 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms