RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-213	ENST00000480393	SLC16A10	Q8TF71	515 aa		32.5	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	CDC27	P30260	824 aa		32.49	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	EVX2	Q03828	476 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	SLC4A8	Q2Y0W8	1093 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	C12orf60	Q5U649	245 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	MAPKAPK5	Q8IW41	473 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	C8orf76	Q96K31	380 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	GADD45B	O75293	160 aa	Predicted RBP	32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	RCAN1	P53805	252 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	SEC23A	Q15436	765 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	FAM173B	Q6P4H8	233 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	ZNF654	Q8IZM8	581 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	TCHH	Q07283	1943 aa		32.48	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	GOLGA6L3	A6NEY3	463 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	GUCY1B3	Q02153	619 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	RTN1	Q16799	776 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	CC2D2B	Q6DHV5	1058 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	PODN	Q7Z5L7	613 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	DBNDD1	Q9H9R9	158 aa		32.47	■■■□□ 2.79
TNFRSF25-213	ENST00000480393		F8W031	263 aa	Predicted RBP	32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	IFIT1B	Q5T764	474 aa	Known RBP	32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	ENAH	Q8N8S7	591 aa	Predicted RBP	32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	DAGLA	Q9Y4D2	1042 aa		32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	ROBO3	Q96MS0	1386 aa		32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	POLR3D	P05423	398 aa	Predicted RBP	32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	UBE2H	P62256	183 aa		32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	CERS5	Q8N5B7	392 aa		32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	TTF2	Q9UNY4	1162 aa	Known RBP	32.46	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	IARS	P41252	1262 aa	Known RBP	32.45	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	NT5C2	P49902	561 aa		32.45	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SCAND2P	Q9GZW5	306 aa	Predicted RBP	32.45	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SAP30BP	Q9UHR5	308 aa	Known RBP	32.45	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CCDC196	A0A1B0GTZ2	297 aa		32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CCDC125	Q86Z20	511 aa		32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SUPT20H	Q8NEM7	779 aa		32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	NUP133	Q8WUM0	1156 aa		32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FAM217B	Q9NTX9	383 aa	Predicted RBP	32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	RBM27	Q9P2N5	1060 aa	Known RBP	32.44	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TSPY2	A6NKD2	308 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	RHBDL3	P58872	404 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	C7orf43	Q8WVR3	580 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SYAP1	Q96A49	352 aa	Predicted RBP	32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FAM47A	Q5JRC9	791 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	L1TD1	Q5T7N2	865 aa	Known RBP	32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CATIP	Q7Z7H3	387 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	PHKB	Q93100	1093 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	MXD3	Q9BW11	206 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FLT1	P17948	1338 aa		32.43	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ECE2	O60344	883 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SSRP1	Q08945	709 aa	Known RBP	32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	NTRK3	Q16288	839 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ZSCAN23	Q3MJ62	389 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ALG1	Q9BT22	464 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	STK36	Q9NRP7	1315 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	DLEC1	Q9Y238	1755 aa		32.42	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SPATA32	Q96LK8	384 aa		32.41	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	MKNK2	Q9HBH9	465 aa		32.41	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ISY1	Q9ULR0	285 aa	Known RBP	32.41	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CDK5RAP2	Q96SN8	1893 aa		32.41	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ELP1	O95163	1332 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TTLL6	Q8N841	843 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	RGS22	Q8NE09	1264 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FBXO18	Q8NFZ0	1043 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	DYNLL2	Q96FJ2	89 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	SLC26A6	Q9BXS9	759 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TFIP11	Q9UBB9	837 aa	Known RBP	32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	IFNAR1	P17181	557 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TPRN	Q4KMQ1	711 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FANCB	Q8NB91	859 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	ZNF287	Q9HBT7	754 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CFAP45	Q9UL16	551 aa		32.4	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	DDX60L	Q5H9U9	1706 aa	Known RBP	32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FSD2	A1L4K1	749 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	C21orf2	O43822	256 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	FMNL1	O95466	1100 aa	Predicted RBP	32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	PPP2R5B	Q15173	497 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	AOC3	Q16853	763 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	OTUD7B	Q6GQQ9	843 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TTC6	Q86TZ1	520 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TRIM22	Q8IYM9	498 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	WASF1	Q92558	559 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	TMEM63C	Q9P1W3	806 aa		32.39	■■■□□ 2.78
TNFRSF25-213	ENST00000480393	CALM1	P0DP23	149 aa		32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	CALM2	P0DP24	149 aa		32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	CALM3	P0DP25	149 aa		32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	SCNN1D	P51172	638 aa		32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	STRIP1	Q5VSL9	837 aa		32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	ZNF396	Q96N95	335 aa	Predicted RBP	32.38	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	GRIPAP1	Q4V328	841 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	TEKT1	Q969V4	418 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	SNED1	Q8TER0	1413 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	DDAH1	O94760	285 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	FKBP1A	P62942	108 aa	Known RBP	32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	KIAA2012	Q0VF49	1180 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	TRIM29	Q14134	588 aa		32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	LEO1	Q8WVC0	666 aa	Predicted RBP	32.37	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	PLCD1	P51178	756 aa		32.36	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	TFAP4	Q01664	338 aa		32.36	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	CCDC93	Q567U6	631 aa		32.36	■■■□□ 2.77
TNFRSF25-213	ENST00000480393	HHIPL2	Q6UWX4	724 aa		32.36	■■■□□ 2.77

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms