RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GIMAP6Q6P9H5 292 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 LRRC2Q9BYS8 371 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
LINC00173-203ENST00000480237 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.44
LINC00173-203ENST00000480237 GAKO14976 1311 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 NEDD4P46934 1319 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 SLC34A2O95436 690 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 LARGE1O95461 756 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 MCM5P33992 734 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 PPARAQ07869 468 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 CUL4AQ13619 759 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 MB21D2Q8IYB1 491 aaPredicted RBP12.32□□□□□ -0.44
LINC00173-203ENST00000480237 CERS5Q8N5B7 392 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 SH3RF3Q8TEJ3 882 aaPredicted RBP12.32□□□□□ -0.44
LINC00173-203ENST00000480237 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
LINC00173-203ENST00000480237 CNNM2Q9H8M5 875 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 WDR19Q8NEZ3 1342 aa12.32□□□□□ -0.44
LINC00173-203ENST00000480237 PRC1O43663 620 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 AKNAD1Q5T1N1 836 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 STRIP1Q5VSL9 837 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 MFSD6Q6ZSS7 791 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 CHST3Q7LGC8 479 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 AMOTL1Q8IY63 956 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 TEX11Q8IYF3 940 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 LARGE2Q8N3Y3 721 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 KCNV2Q8TDN2 545 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 BRF1Q92994 677 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 MXD3Q9BW11 206 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 KRT23Q9C075 422 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 RNF41Q9H4P4 317 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-203ENST00000480237 SPON1Q9HCB6 807 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-203ENST00000480237 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-203ENST00000480237 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 ARPP21Q9UBL0 812 aaPredicted RBP12.31□□□□□ -0.44
LINC00173-203ENST00000480237 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
LINC00173-203ENST00000480237 GPR75-ASB3A0A0A6YYF3 556 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 B4E1Z4 1266 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 PPP4CP60510 307 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 CCDC83Q8IWF9 413 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 STK11IPQ8N1F8 1099 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 STAG1Q8WVM7 1258 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 CWC22Q9HCG8 908 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 TPCN1Q9ULQ1 816 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 BCS1LQ9Y276 419 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 CYP2D7A0A087X1C5 515 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 DDIT3P35638 169 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 SCNN1DP51172 638 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 ME3Q16798 604 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 NIM1KQ8IY84 436 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 TEKT1Q969V4 418 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 KCNQ5Q9NR82 932 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
LINC00173-203ENST00000480237 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
LINC00173-203ENST00000480237 ANTXR2P58335 489 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 MAP3K9P80192 1104 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 APOBRQ0VD83 1088 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 STK3Q13188 491 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 ARSIQ5FYB1 569 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 CTR9Q6PD62 1173 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 KIAA0825Q8IV33 1275 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
LINC00173-203ENST00000480237 ROBO3Q96MS0 1386 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L12C9JPN9 530 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L21D6R901 530 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 KDM4AO75164 1064 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 SLC4A8Q2Y0W8 1093 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 MAPKAPK5Q8IW41 473 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 SMC3Q9UQE7 1217 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 FLT1P17948 1338 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 MYO3BQ8WXR4 1341 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
LINC00173-203ENST00000480237 DPYSL4O14531 572 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 TBC1D12O60347 775 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 USP17L8P0C7I0 530 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 CYP2D6P10635 497 aa12.27□□□□□ -0.44
LINC00173-203ENST00000480237 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.44
LINC00173-203ENST00000480237 CRKP46108 304 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms