RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 DDTLA6NHG4 134 aaPredicted RBP19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 RPS6KB1P23443 525 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 TNNI2P48788 182 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 MAP3K10Q02779 954 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 EVX2Q03828 476 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 RBM26Q5T8P6 1007 aaKnown RBP19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 MFSD6Q6ZSS7 791 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 RUFY3Q7L099 469 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 APOBEC3FQ8IUX4 373 aaKnown RBP19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 NCOA7Q8NI08 942 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 ZC3H15Q8WU90 426 aaKnown RBP19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 MTA3Q9BTC8 594 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 PI4KBQ9UBF8 816 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 NEDD4P46934 1319 aa19.95■□□□□ 0.78
SCAMP3-207ENST00000480219 HLA-DOAP06340 250 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 CASTP20810 708 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 EPHX2P34913 555 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 EXOSC10Q01780 885 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 COL9A3Q14050 684 aaPredicted RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 BLOC1S2Q6QNY1 142 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 DHX32Q7L7V1 743 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 SNX21Q969T3 373 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 AGXT2Q9BYV1 514 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 KRT23Q9C075 422 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 TAF1DQ9H5J8 278 aaPredicted RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 SWAP70Q9UH65 585 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 PPP2R3BQ9Y5P8 575 aa19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 ASTN2O75129 1339 aaPredicted RBP19.94■□□□□ 0.78
SCAMP3-207ENST00000480219 TCP10L2B9ZVM9 353 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 PDE4BQ07343 736 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 TCP10Q12799 353 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 TRDNQ13061 729 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 FOXP4Q8IVH2 680 aaPredicted RBP19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 TEPSINQ96N21 525 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 VEZTQ9HBM0 779 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 ZNF287Q9HBT7 754 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 SERPINB13Q9UIV8 391 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 CYP46A1Q9Y6A2 500 aa19.93■□□□□ 0.78
SCAMP3-207ENST00000480219 TBC1D12O60347 775 aa19.92■□□□□ 0.78
SCAMP3-207ENST00000480219 RASA3Q14644 834 aa19.92■□□□□ 0.78
SCAMP3-207ENST00000480219 ANGEL2Q5VTE6 544 aaKnown RBP19.92■□□□□ 0.78
SCAMP3-207ENST00000480219 RALYLQ86SE5 291 aaKnown RBP19.92■□□□□ 0.78
SCAMP3-207ENST00000480219 UPF3BQ9BZI7 483 aaKnown RBP19.92■□□□□ 0.78
SCAMP3-207ENST00000480219 MCM5P33992 734 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 CDK8P49336 464 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 NEK4P51957 841 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 ANTXR2P58335 489 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 PNMA8AQ86V59 439 aaPredicted RBP19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 NKX2-3Q8TAU0 364 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 ESR2Q92731 530 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 DYNLL2Q96FJ2 89 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 DNAJC18Q9H819 358 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 INCENPQ9NQS7 918 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 GGA3Q9NZ52 723 aa19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 HERC5Q9UII4 1024 aaKnown RBP19.91■□□□□ 0.78
SCAMP3-207ENST00000480219 B4E1Z4 1266 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 RASA1P20936 1047 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 TATDN1Q6P1N9 297 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 TMEM39BQ9GZU3 492 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 DEFB129Q9H1M3 183 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 PLIN4Q96Q06 1357 aa19.9■□□□□ 0.78
SCAMP3-207ENST00000480219 ST18O60284 1047 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 CPA1P15085 419 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 SHMT1P34896 483 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 MCM2P49736 904 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 CYB5R4Q7L1T6 521 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 ZSWIM5Q9P217 1185 aa19.89■□□□□ 0.77
SCAMP3-207ENST00000480219 GREB1LQ9C091 1923 aaPredicted RBP19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 KDM4AO75164 1064 aa19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 SLC44A5Q8NCS7 719 aa19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 TMEM87BQ96K49 555 aa19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 PDRG1Q9NUG6 133 aa19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 TCP11L1Q9NUJ3 509 aa19.88■□□□□ 0.77
SCAMP3-207ENST00000480219 PRC1O43663 620 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 VEGFAP15692 232 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 ANP32AP39687 249 aaKnown RBP19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 NOVP48745 357 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 EVCP57679 992 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 SLC4A8Q2Y0W8 1093 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 ZSCAN29Q8IWY8 852 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 CCDC17Q96LX7 622 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 MKNK2Q9HBH9 465 aa19.87■□□□□ 0.77
SCAMP3-207ENST00000480219 PRDM1O75626 825 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 CD2BP2O95400 341 aaKnown RBP19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 TOB2Q14106 344 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 ANKRD1Q15327 319 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 CDAN1Q8IWY9 1227 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 NEDD1Q8NHV4 660 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 IGDCC4Q8TDY8 1250 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 HOOK2Q96ED9 719 aa19.86■□□□□ 0.77
SCAMP3-207ENST00000480219 LIFRP42702 1097 aa19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 AK2P54819 239 aa19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 SEC23AQ15436 765 aa19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 ZNF444Q8N0Y2 327 aaPredicted RBP19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 CRACR2BQ8N4Y2 399 aaPredicted RBP19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 ANKS1AQ92625 1134 aa19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 DCPSQ96C86 337 aaKnown RBP19.85■□□□□ 0.77
SCAMP3-207ENST00000480219 SSC5DA1L4H1 1573 aa19.84■□□□□ 0.77
SCAMP3-207ENST00000480219 IGKV6D-41A0A0C4DH26 115 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms