RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SND1Q7KZF4 910 aaKnown RBP eCLIP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 RRP36Q96EU6 259 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 CARD14Q9BXL6 1004 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SNRKQ9NRH2 765 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 RBBP5Q15291 538 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 EMBQ6PCB8 327 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 RPAINQ86UA6 219 aa6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 PUF60Q9UHX1 559 aaKnown RBP6.86□□□□□ -1.31
PRPF4B-205ENST00000480058 SYNRGQ9UMZ2 1314 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 A0A1B0GVL5 298 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 EXOC5O00471 708 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 ZPR1O75312 459 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 CNGA1P29973 690 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 NBPF14Q5TI25 921 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 TUBB6Q9BUF5 446 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 FAM114A2Q9NRY5 505 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 RTEL1Q9NZ71 1219 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 UTP11Q9Y3A2 253 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 PLEKHG3A1L390 1219 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 TRAF5O00463 557 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 SEMA3EO15041 775 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 KARSQ15046 597 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 KRT71Q3SY84 523 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 TCEANC2Q96MN5 208 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 NLRP3Q96P20 1036 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 SH2D4AQ9H788 454 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 VEZTQ9HBM0 779 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 POLR3EQ9NVU0 708 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 SLC4A4Q9Y6R1 1079 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 ARHGAP31Q2M1Z3 1444 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 TRPC3Q13507 836 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 APBB1IPQ7Z5R6 666 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 XPO4Q9C0E2 1151 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 RNF216Q9NWF9 866 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 CHPF2Q9P2E5 772 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 EDC4Q6P2E9 1401 aaKnown RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 SOS2Q07890 1332 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 DNA2P51530 1060 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 POSTNQ15063 836 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 NONOQ15233 471 aaKnown RBP eCLIP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 RNF168Q8IYW5 571 aaPredicted RBP6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 AFAP1L2Q8N4X5 818 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 SBNO1A3KN83 1393 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 BCAS4Q8TDM0 211 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 COPRSQ9NQ92 184 aa6.85□□□□□ -1.31
PRPF4B-205ENST00000480058 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ZC3H6P61129 1189 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MAP7D1Q3KQU3 841 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 CCDC62Q6P9F0 684 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ENOX1Q8TC92 643 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MIPOL1Q8TD10 442 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MCUR1Q96AQ8 359 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MIS12Q9H081 205 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ZBTB3Q9H5J0 574 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 CNOT10Q9H9A5 744 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 THEGQ9P2T0 379 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 DENND2AQ9ULE3 1009 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 EXOC7Q9UPT5 735 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ABCC10Q5T3U5 1492 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 SPDYE3A6NKU9 549 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 FAM177BA6PVY3 158 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 RAPGEF1Q13905 1077 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 SLC39A14Q15043 492 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 LIN9Q5TKA1 542 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 LRRC8AQ8IWT6 810 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PLBD2Q8NHP8 589 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 CDCA7Q9BWT1 371 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 CASQ2O14958 399 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 VIMP08670 466 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TSPY3P0CV98 308 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TSPY8P0CW00 308 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ERCC3P19447 782 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 EIF3BP55884 814 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 IFT81Q8WYA0 676 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 FAM81BQ96LP2 452 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 SEC62Q99442 399 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 METTL22Q9BUU2 404 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ANO9A1A5B4 782 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 GTPBP6O43824 516 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 H2AFZP0C0S5 128 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TROVE2P10155 538 aaKnown RBP eCLIP6.84□□□□□ -1.314e-10■■□□□ 14.4
PRPF4B-205ENST00000480058 EPHB4P54760 987 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PLCB3Q01970 1234 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PPP1R7Q15435 360 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TTC38Q5R3I4 469 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 H2AFVQ71UI9 128 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PNMA8AQ86V59 439 aaPredicted RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MAP4K1Q92918 833 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 BICD1Q96G01 975 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 Q9H521 79 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 LAD1O00515 517 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 MTHFSDQ2M296 383 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 ALS2CLQ60I27 953 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TSPYL6Q8N831 410 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 RAB3IL1Q8TBN0 382 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 IP6K1Q92551 441 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TSC1Q92574 1164 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 RAB3IPQ96QF0 476 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms