RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 TEPSINQ96N21 525 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 KIF3CO14782 793 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 SLC27A2O14975 620 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 CYP21A2P08686 494 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 ANAPC15P60006 121 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 TSGA10IPQ3SY00 556 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 SH3BP5LQ7L8J4 393 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 METTL16Q86W50 562 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 ZNF784Q8NCA9 323 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 SMC1BQ8NDV3 1235 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 GLIS2Q9BZE0 524 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 MKNK2Q9HBH9 465 aa13.94□□□□□ -0.18
TRAPPC12-219ENST00000479955 ADM5C9JUS6 153 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 HAND2P61296 217 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 NBPF12Q5TAG4 269 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 C16orf86Q6ZW13 317 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 ZNF444Q8N0Y2 327 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 RBM46Q8TBY0 533 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 KCNB2Q92953 911 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 CDCA5Q96FF9 252 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 ZNF341Q9BYN7 854 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 C22orf23Q9BZE7 217 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 KRT23Q9C075 422 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 SCAF8Q9UPN6 1271 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 LAMB1P07942 1786 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 ROBO3Q96MS0 1386 aa13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 DDX60LQ5H9U9 1706 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-219ENST00000479955 CYP2D7A0A087X1C5 515 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 HMGB1P09429 215 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 FGRP09769 529 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 CYP2D6P10635 497 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 PSMA5P28066 241 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 CTDSPL2Q05D32 466 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 GABPAQ06546 454 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 SLC4A8Q2Y0W8 1093 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 STAG1Q8WVM7 1258 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 CCDC17Q96LX7 622 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 LAMA4Q16363 1823 aa13.92□□□□□ -0.18
TRAPPC12-219ENST00000479955 UNCXA6NJT0 531 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 ORC4O43929 436 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 CDK8P49336 464 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 RBM25P49756 843 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 FKBP1BP68106 108 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 FSTL1Q12841 308 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 MIGA2Q7L4E1 593 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 NCOA7Q8NI08 942 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 ESR2Q92731 530 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
TRAPPC12-219ENST00000479955 E7EWF7 191 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 CERKLQ49MI3 558 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 PRAMEF18Q5VWM3 479 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 ARMC9Q7Z3E5 817 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 DYNLL2Q96FJ2 89 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 NEK1Q96PY6 1258 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
TRAPPC12-219ENST00000479955 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 CCDC178Q5BJE1 867 aa13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 STK11IPQ8N1F8 1099 aa13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 C2orf69Q8N8R5 385 aa13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
TRAPPC12-219ENST00000479955 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 CTNND1O60716 968 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 MCM5P33992 734 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 SHMT1P34896 483 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 MAP3K11Q16584 847 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 TBC1D10CQ8IV04 446 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 IL17RAQ96F46 866 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 TBC1D32Q96NH3 1257 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 NBPF3Q9H094 633 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 ZNF112Q9UJU3 913 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 MYH8P13535 1937 aa13.88□□□□□ -0.19
TRAPPC12-219ENST00000479955 PHF20L1A8MW92 1017 aa13.87□□□□□ -0.19
TRAPPC12-219ENST00000479955 TRAF5O00463 557 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms