RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MYO5AQ9Y4I1 1855 aaKnown RBP17.5■□□□□ 0.39
ATG4B-218ENST00000479554 ECM2O94769 699 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-218ENST00000479554 CYP2C8P10632 490 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 PRMT2P55345 433 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 PPP4CP60510 307 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 CCDC84Q86UT8 332 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-218ENST00000479554 AACSQ86V21 672 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 ZNF333Q96JL9 665 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 DHX36Q9H2U1 1008 aaKnown RBP17.5■□□□□ 0.39
ATG4B-218ENST00000479554 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
ATG4B-218ENST00000479554 PDE4DIPQ5VU43 2346 aa17.5■□□□□ 0.39
ATG4B-218ENST00000479554 FLT1P17948 1338 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 ATAD5Q96QE3 1844 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
ATG4B-218ENST00000479554 PSMC4P43686 418 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 MAPKAPK5Q8IW41 473 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 TGFBRAP1Q8WUH2 860 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 PI4KBQ9UBF8 816 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 DDX19BQ9UMR2 479 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 COG6Q9Y2V7 657 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 SLC45A1Q9Y2W3 748 aa17.49■□□□□ 0.39
ATG4B-218ENST00000479554 CDK5RAP2Q96SN8 1893 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 FMNL1O95466 1100 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-218ENST00000479554 BCRP11274 1271 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 CYP7A1P22680 504 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 TRIM47Q96LD4 638 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 TMEM106CQ9BVX2 250 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 IL1RAPL2Q9NP60 686 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 AGTPBP1Q9UPW5 1226 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 SIPA1L1O43166 1804 aa17.48■□□□□ 0.39
ATG4B-218ENST00000479554 HMMRO75330 724 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 OSBPP22059 807 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 HOXD10P28358 340 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 CTGFP29279 349 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 CAP2P40123 477 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 PRPF38BQ5VTL8 546 aaKnown RBP17.47■□□□□ 0.39
ATG4B-218ENST00000479554 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-218ENST00000479554 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 SH3TC2Q8TF17 1288 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 SRRDQ9UH36 339 aa17.47■□□□□ 0.39
ATG4B-218ENST00000479554 LOC285556D6RIA3 1793 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 FCGRTP55899 365 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 DYNLL1P63167 89 aaKnown RBP17.46■□□□□ 0.39
ATG4B-218ENST00000479554 SLC4A8Q2Y0W8 1093 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 CERS3Q8IU89 383 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 CRACR2BQ8N4Y2 399 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-218ENST00000479554 MAGEB6Q8N7X4 407 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 ZNF280CQ8ND82 737 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-218ENST00000479554 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 CHMP4BQ9H444 224 aaKnown RBP17.46■□□□□ 0.39
ATG4B-218ENST00000479554 ZBTB40Q9NUA8 1239 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 PNMA3Q9UL41 463 aa17.46■□□□□ 0.39
ATG4B-218ENST00000479554 MYPNQ86TC9 1320 aa17.46■□□□□ 0.38
ATG4B-218ENST00000479554 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 APBB1O00213 710 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 EN2P19622 333 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 SPP2Q13103 211 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 TREML2Q5T2D2 321 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 MIGA1Q8NAN2 632 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 PROCA1Q8NCQ7 364 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 RAET1EQ8TD07 263 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 ANTXR1Q9H6X2 564 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 AS3MTQ9HBK9 375 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 SAP30BPQ9UHR5 308 aaKnown RBP17.45■□□□□ 0.38
ATG4B-218ENST00000479554 PALD1Q9ULE6 856 aa17.45■□□□□ 0.38
ATG4B-218ENST00000479554 USP5P45974 858 aa17.44■□□□□ 0.38
ATG4B-218ENST00000479554 HMGCS2P54868 508 aa17.44■□□□□ 0.38
ATG4B-218ENST00000479554 TMED8Q6PL24 325 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-218ENST00000479554 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
ATG4B-218ENST00000479554 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
ATG4B-218ENST00000479554 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
ATG4B-218ENST00000479554 MGAMO43451 1857 aa17.44■□□□□ 0.38
ATG4B-218ENST00000479554 ASNSP08243 561 aa17.43■□□□□ 0.38
ATG4B-218ENST00000479554 IFIT2P09913 472 aaKnown RBP17.43■□□□□ 0.38
ATG4B-218ENST00000479554 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.38
ATG4B-218ENST00000479554 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
ATG4B-218ENST00000479554 KIAA0100Q14667 2235 aaKnown RBP17.42■□□□□ 0.38
ATG4B-218ENST00000479554 GRK4P32298 578 aa17.42■□□□□ 0.38
ATG4B-218ENST00000479554 PRKCZQ05513 592 aa17.42■□□□□ 0.38
ATG4B-218ENST00000479554 TTF1Q15361 905 aaPredicted RBP17.42■□□□□ 0.38
ATG4B-218ENST00000479554 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
ATG4B-218ENST00000479554 MYH1P12882 1939 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 GDF11O95390 407 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 MTMR2Q13614 643 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 SH3D19Q5HYK7 790 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 ANKRD13CQ8N6S4 541 aa17.41■□□□□ 0.38
ATG4B-218ENST00000479554 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATG4B-218ENST00000479554 WDR18Q9BV38 432 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms