RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 VPS18Q9P253 973 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
CNKSR3-204ENST00000479339 PPFIA4O75335 1185 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 ARMCX5Q6P1M9 558 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 KCNB2Q92953 911 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 BPIFA3Q9BQP9 254 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 PARD6BQ9BYG5 372 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 ERLIN1O75477 346 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 TXLNAP40222 546 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 PPP2R3AQ06190 1150 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 FSTL1Q12841 308 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 ACBD3Q9H3P7 528 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 ZNF277Q9NRM2 450 aaPredicted RBP15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 CFAP45Q9UL16 551 aa15.09■□□□□ 0.01
CNKSR3-204ENST00000479339 WDR90Q96KV7 1748 aa15.08■□□□□ 0.01
CNKSR3-204ENST00000479339 PPEF1O14829 653 aaPredicted RBP15.08■□□□□ 0
CNKSR3-204ENST00000479339 MAP3K9P80192 1104 aa15.08■□□□□ 0
CNKSR3-204ENST00000479339 ST3GAL1Q11201 340 aa15.08■□□□□ 0
CNKSR3-204ENST00000479339 DNAJC21Q5F1R6 531 aaKnown RBP15.08■□□□□ 0
CNKSR3-204ENST00000479339 FAM71BQ8TC56 605 aa15.08■□□□□ 0
CNKSR3-204ENST00000479339 PGBD1Q96JS3 809 aa15.08■□□□□ 0
CNKSR3-204ENST00000479339 PHAXQ9H814 394 aaKnown RBP15.08■□□□□ 0
CNKSR3-204ENST00000479339 POTECB2RU33 542 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
CNKSR3-204ENST00000479339 USP5P45974 858 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 GNL2Q13823 731 aaKnown RBP15.07■□□□□ 0
CNKSR3-204ENST00000479339 E2F4Q16254 413 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 RIC3Q7Z5B4 369 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 IL25Q9H293 177 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 MRFAP1Q9Y605 127 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 ATP5J2-PTCD1G3V325 749 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 ANKRD1Q15327 319 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 ME3Q16798 604 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 TMC6Q7Z403 805 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 CNTROBQ8N137 903 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
CNKSR3-204ENST00000479339 RBM28Q9NW13 759 aaKnown RBP15.07■□□□□ 0
CNKSR3-204ENST00000479339 RAI14Q9P0K7 980 aa15.07■□□□□ 0
CNKSR3-204ENST00000479339 FERMT3Q86UX7 667 aa15.06■□□□□ 0
CNKSR3-204ENST00000479339 EGFL6Q8IUX8 553 aa15.06■□□□□ 0
CNKSR3-204ENST00000479339 AOPEPQ8N6M6 819 aa15.06■□□□□ 0
CNKSR3-204ENST00000479339 RUFY2Q8WXA3 655 aa15.06■□□□□ 0
CNKSR3-204ENST00000479339 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
CNKSR3-204ENST00000479339 BBOX1O75936 387 aa15.05■□□□□ 0
CNKSR3-204ENST00000479339 TUBBP07437 444 aa15.05■□□□□ 0
CNKSR3-204ENST00000479339 HSP90B2PQ58FF3 399 aa15.05■□□□□ 0
CNKSR3-204ENST00000479339 LRRC31Q6UY01 552 aa15.05■□□□□ 0
CNKSR3-204ENST00000479339 JAKMIP1Q96N16 626 aaKnown RBP15.05■□□□□ 0
CNKSR3-204ENST00000479339 GBP3Q9H0R5 595 aa15.05■□□□□ 0
CNKSR3-204ENST00000479339 DDNO94850 711 aaPredicted RBP15.05■□□□□ -0
CNKSR3-204ENST00000479339 DDX58O95786 925 aaKnown RBP15.05■□□□□ -0
CNKSR3-204ENST00000479339 APLP1P51693 650 aa15.05■□□□□ -0
CNKSR3-204ENST00000479339 NBPF20Q3BBV1 942 aa15.05■□□□□ -0
CNKSR3-204ENST00000479339 CCDC73Q6ZRK6 1079 aa15.05■□□□□ -0
CNKSR3-204ENST00000479339 DDX46Q7L014 1031 aaKnown RBP15.05■□□□□ -0
CNKSR3-204ENST00000479339 SMC1BQ8NDV3 1235 aa15.05■□□□□ -0
CNKSR3-204ENST00000479339 ALDH8A1Q9H2A2 487 aaPredicted RBP15.05■□□□□ -0
CNKSR3-204ENST00000479339 PDE11AQ9HCR9 933 aa15.05■□□□□ -0
CNKSR3-204ENST00000479339 LAMB2P55268 1798 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 FZD9O00144 591 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 KINO60870 393 aaKnown RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 ERLIN2O94905 339 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 ATP8B2P98198 1209 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 SETQ01105 290 aaPredicted RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 GRAPQ13588 217 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 SF3B3Q15393 1217 aaKnown RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 EP400NLQ6ZTU2 488 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 GRAPLQ8TC17 118 aaPredicted RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 DDX11Q96FC9 970 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 FAM89AQ96GI7 184 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 FOXR1Q6PIV2 292 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 SLC51AQ86UW1 340 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 SP8Q8IXZ3 490 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 MYD88Q99836 296 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 STK31Q9BXU1 1019 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 XPO4Q9C0E2 1151 aaKnown RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 TMX4Q9H1E5 349 aaPredicted RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 TFIP11Q9UBB9 837 aaKnown RBP15.04■□□□□ -0
CNKSR3-204ENST00000479339 RAB21Q9UL25 225 aa15.04■□□□□ -0
CNKSR3-204ENST00000479339 ZNF541Q9H0D2 1346 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 PPP1R12AO14974 1030 aaPredicted RBP15.03■□□□□ -0
CNKSR3-204ENST00000479339 RAB11FIP3O75154 756 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 ZKSCAN1P17029 563 aaPredicted RBP15.03■□□□□ -0
CNKSR3-204ENST00000479339 PSMA5P28066 241 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 BEND6Q5SZJ8 279 aaPredicted RBP15.03■□□□□ -0
CNKSR3-204ENST00000479339 ATL3Q6DD88 541 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 FAM173BQ6P4H8 233 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 POTEDQ86YR6 584 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 ZBTB38Q8NAP3 1195 aaPredicted RBP15.03■□□□□ -0
CNKSR3-204ENST00000479339 VPS33BQ9H267 617 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms