RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 EAF2Q96CJ1 260 aaPredicted RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 RRP36Q96EU6 259 aaKnown RBP24.01■■□□□ 1.43
SDF4-206ENST00000478938 KIF9Q9HAQ2 790 aa24.01■■□□□ 1.43
SDF4-206ENST00000478938 PPP1R12BO60237 982 aaPredicted RBP24■■□□□ 1.43
SDF4-206ENST00000478938 SRGAP2O75044 1071 aa24■■□□□ 1.43
SDF4-206ENST00000478938 ATP1A2P50993 1020 aa24■■□□□ 1.43
SDF4-206ENST00000478938 NAP1L1P55209 391 aaKnown RBP24■■□□□ 1.43
SDF4-206ENST00000478938 ANO1Q5XXA6 986 aa24■■□□□ 1.43
SDF4-206ENST00000478938 AP1ARQ63HQ0 302 aa24■■□□□ 1.43
SDF4-206ENST00000478938 CAPZA3Q96KX2 299 aa24■■□□□ 1.43
SDF4-206ENST00000478938 EDC4Q6P2E9 1401 aaKnown RBP24■■□□□ 1.43
SDF4-206ENST00000478938 NR1I3Q14994 352 aa24■■□□□ 1.43
SDF4-206ENST00000478938 PPFIBP1Q86W92 1011 aa24■■□□□ 1.43
SDF4-206ENST00000478938 ARL8AQ96BM9 186 aa24■■□□□ 1.43
SDF4-206ENST00000478938 TTF2Q9UNY4 1162 aaKnown RBP24■■□□□ 1.43
SDF4-206ENST00000478938 NEO1Q92859 1461 aa24■■□□□ 1.43
SDF4-206ENST00000478938 ANKRD33BA6NCL7 494 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 KIF28PB7ZC32 967 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 ZNF827Q17R98 1081 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 ADCY2Q08462 1091 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 TTMPQ5BVD1 217 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 NAA35Q5VZE5 725 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 NBPF10Q6P3W6 841 aaKnown RBP23.99■■□□□ 1.43
SDF4-206ENST00000478938 CCNI2Q6ZMN8 369 aaPredicted RBP23.99■■□□□ 1.43
SDF4-206ENST00000478938 SYNE3Q6ZMZ3 975 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 ARMC2Q8NEN0 867 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 NAA15Q9BXJ9 866 aaKnown RBP23.99■■□□□ 1.43
SDF4-206ENST00000478938 ETAA1Q9NY74 926 aa23.99■■□□□ 1.43
SDF4-206ENST00000478938 EZRP15311 586 aaKnown RBP23.98■■□□□ 1.43
SDF4-206ENST00000478938 TAF7Q15545 349 aaPredicted RBP23.98■■□□□ 1.43
SDF4-206ENST00000478938 SHC4Q6S5L8 630 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 SPATS2Q86XZ4 545 aaKnown RBP23.98■■□□□ 1.43
SDF4-206ENST00000478938 PARP9Q8IXQ6 854 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 TRIM10Q9UDY6 481 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 PEX19P40855 299 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 GOLGA8KD6RF30 607 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 HDGFP51858 240 aaKnown RBP23.98■■□□□ 1.43
SDF4-206ENST00000478938 IFT88Q13099 833 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 MICALCLQ6ZW33 695 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 SND1Q7KZF4 910 aaKnown RBP eCLIP23.98■■□□□ 1.431e-7■■□□□ 12.1
SDF4-206ENST00000478938 CHST3Q7LGC8 479 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 TRAPPC11Q7Z392 1133 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 SH2D3CQ8N5H7 860 aa23.98■■□□□ 1.43
SDF4-206ENST00000478938 MPHOSPH10O00566 681 aaKnown RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 AP1G2O75843 785 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 SKOR1P84550 965 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 SPATS2LQ9NUQ6 558 aaKnown RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 HPSEQ9Y251 543 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 CPS1P31327 1500 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 TARSL2A2RTX5 802 aaKnown RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 GBP2P32456 591 aaPredicted RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 CYB5D1Q6P9G0 228 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 DHX32Q7L7V1 743 aaKnown RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 YTHDF3Q7Z739 585 aaKnown RBP23.97■■□□□ 1.43
SDF4-206ENST00000478938 PARD3BQ8TEW8 1205 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 BORCS6Q96GS4 357 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 C8orf76Q96K31 380 aa23.97■■□□□ 1.43
SDF4-206ENST00000478938 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
SDF4-206ENST00000478938 NRKQ7Z2Y5 1582 aa23.96■■□□□ 1.43
SDF4-206ENST00000478938 MFAP3LO75121 409 aa23.96■■□□□ 1.43
SDF4-206ENST00000478938 PDIA3P30101 505 aaKnown RBP23.96■■□□□ 1.43
SDF4-206ENST00000478938 CASP14P31944 242 aa23.96■■□□□ 1.43
SDF4-206ENST00000478938 MED15Q96RN5 788 aa23.96■■□□□ 1.43
SDF4-206ENST00000478938 TPX2Q9ULW0 747 aaKnown RBP23.96■■□□□ 1.43
SDF4-206ENST00000478938 SH3GL3Q99963 347 aa23.96■■□□□ 1.43
SDF4-206ENST00000478938 A0A1B0GTH6 734 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 SSR1P43307 286 aaKnown RBP23.95■■□□□ 1.42
SDF4-206ENST00000478938 PLCB4Q15147 1175 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 WAPLQ7Z5K2 1190 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 ZNF473Q8WTR7 871 aaKnown RBP23.95■■□□□ 1.42
SDF4-206ENST00000478938 ATP6V0A4Q9HBG4 840 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 NDUFB9Q9Y6M9 179 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 ERVK-24P63145 666 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 HDGFL1Q5TGJ6 251 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 KCTD16Q68DU8 428 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 AENQ8WTP8 325 aaKnown RBP23.95■■□□□ 1.42
SDF4-206ENST00000478938 CCDC114Q96M63 670 aa23.95■■□□□ 1.42
SDF4-206ENST00000478938 U3KPZ7 1027 aaPredicted RBP23.95■■□□□ 1.42
SDF4-206ENST00000478938 NCKAP5LQ9HCH0 1330 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 SASH1O94885 1247 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 ATP1A1P05023 1023 aaKnown RBP23.94■■□□□ 1.42
SDF4-206ENST00000478938 BEND3Q5T5X7 828 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 SLF1Q9BQI6 1058 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 MAN1B1Q9UKM7 699 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 TAOK2Q9UL54 1235 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 GUCA1BQ9UMX6 200 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 LSP1P33241 339 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 FXR1P51114 621 aaKnown RBP eCLIP23.94■■□□□ 1.42
SDF4-206ENST00000478938 HDLBPQ00341 1268 aaKnown RBP23.94■■□□□ 1.42
SDF4-206ENST00000478938 GUCY1A3Q02108 690 aa23.94■■□□□ 1.42
SDF4-206ENST00000478938 MAP3K19Q56UN5 1328 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 PIK3C2BO00750 1634 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 NUTM2AQ8IVF1 878 aaPredicted RBP23.93■■□□□ 1.42
SDF4-206ENST00000478938 CCDC26Q8TAB7 109 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 MICAL1Q8TDZ2 1067 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 SPDL1Q96EA4 605 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 HAUS2Q9NVX0 235 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 MYO1AQ9UBC5 1043 aa23.93■■□□□ 1.42
SDF4-206ENST00000478938 FAM184BQ9ULE4 1060 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms