RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 USP40Q9NVE5 1235 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 RBM8AQ9Y5S9 174 aaKnown RBP13.96□□□□□ -0.17
PDCD11-204ENST00000478543 KIAA0100Q14667 2235 aaKnown RBP13.96□□□□□ -0.17
PDCD11-204ENST00000478543 GNAT2P19087 354 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 USP5P45974 858 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 RHBDL3P58872 404 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 PRKG1Q13976 671 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 APOBEC3HQ6NTF7 200 aaKnown RBP13.95□□□□□ -0.18
PDCD11-204ENST00000478543 CDC42EP5Q6NZY7 148 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 DSCC1Q9BVC3 393 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 MRIQ9BWK5 157 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 EPB41L4AQ9HCS5 686 aaPredicted RBP13.95□□□□□ -0.18
PDCD11-204ENST00000478543 UNC80Q8N2C7 3258 aa13.95□□□□□ -0.18
PDCD11-204ENST00000478543 SSC5DA1L4H1 1573 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 PATL2C9JE40 543 aaKnown RBP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 PLCG2P16885 1265 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 TDO2P48775 406 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 TTLL12Q14166 644 aaPredicted RBP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 MAPKAPK5Q8IW41 473 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 TGFBRAP1Q8WUH2 860 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 MAP4K1Q92918 833 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 PRMT6Q96LA8 375 aaPredicted RBP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
PDCD11-204ENST00000478543 TDRD3Q9H7E2 651 aaKnown RBP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
PDCD11-204ENST00000478543 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 CLRN2A0PK11 232 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 WNT10BO00744 389 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 MCCP23508 829 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 CACNB3P54284 484 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 SREBF2Q12772 1141 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 PICALMQ13492 652 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 SPRYD7Q5W111 196 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 CERS3Q8IU89 383 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 IFNL3Q8IZI9 196 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 ARMC5Q96C12 935 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 NAPBQ9H115 298 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 PTPN22Q9Y2R2 807 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 NAV1Q8NEY1 1877 aa13.93□□□□□ -0.18
PDCD11-204ENST00000478543 ECM29Q5VYK3 1845 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 FGAP02671 866 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 SLC4A8Q2Y0W8 1093 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 DDRGK1Q96HY6 314 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 SAP30BPQ9UHR5 308 aaKnown RBP13.92□□□□□ -0.18
PDCD11-204ENST00000478543 CDK5RAP2Q96SN8 1893 aa13.92□□□□□ -0.18
PDCD11-204ENST00000478543 RPAP1Q9BWH6 1393 aaPredicted RBP13.92□□□□□ -0.18
PDCD11-204ENST00000478543 FLT1P17948 1338 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 SLC27A2O14975 620 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 WDHD1O75717 1129 aaPredicted RBP13.91□□□□□ -0.18
PDCD11-204ENST00000478543 HAND2P61296 217 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 NFIAQ12857 509 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 ALX1Q15699 326 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 CREB3L3Q68CJ9 461 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
PDCD11-204ENST00000478543 CLMNQ96JQ2 1002 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 TBC1D32Q96NH3 1257 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 VEZTQ9HBM0 779 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 DCP1AQ9NPI6 582 aaPredicted RBP13.91□□□□□ -0.18
PDCD11-204ENST00000478543 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
PDCD11-204ENST00000478543 ATP8A2Q9NTI2 1148 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 TMOD2Q9NZR1 351 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 ZNF70Q9UC06 446 aaPredicted RBP13.91□□□□□ -0.18
PDCD11-204ENST00000478543 CTNNA3Q9UI47 895 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 PALD1Q9ULE6 856 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 ZSWIM8A7E2V4 1837 aa13.91□□□□□ -0.18
PDCD11-204ENST00000478543 CYP2D7A0A087X1C5 515 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 MINDY4BA8MYZ0 360 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 H0YGN5 161 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 EPB41L2O43491 1005 aaKnown RBP13.9□□□□□ -0.18
PDCD11-204ENST00000478543 CYP2D6P10635 497 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 HSPA4P34932 840 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 GJA5P36382 358 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 MMP14P50281 582 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 NECTIN1Q15223 517 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 SPDYE2Q495Y8 402 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 TSHZ2Q9NRE2 1034 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 MCM9Q9NXL9 1143 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
PDCD11-204ENST00000478543 FOCADQ5VW36 1801 aa13.9□□□□□ -0.18
PDCD11-204ENST00000478543 ZMYM6O95789 1325 aa13.9□□□□□ -0.19
PDCD11-204ENST00000478543 CEP290O15078 2479 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 TCP10L2B9ZVM9 353 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 USP17L12C9JPN9 530 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 USP17L21D6R901 530 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 DLL1O00548 723 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 MYO1BO43795 1136 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 CYP21A2P08686 494 aa13.89□□□□□ -0.19
PDCD11-204ENST00000478543 RBM25P49756 843 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms