RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ZNF384Q8TF68 577 aa17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 CHMP4BQ9H444 224 aaKnown RBP17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 C1orf115Q9H7X2 142 aa17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 AK9Q5TCS8 1911 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 HLA-DOAP06340 250 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 CYP2C8P10632 490 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 BCRP11274 1271 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 OSBPP22059 807 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 GRK4P32298 578 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 UBXN2AP68543 259 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 CAP1Q01518 475 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 CRACR2BQ8N4Y2 399 aaPredicted RBP17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 SNRKQ9NRH2 765 aa17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 AATFQ9NY61 560 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMARCE1-209ENST00000478349 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 PPP4CP60510 307 aa17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 ZNF280CQ8ND82 737 aa17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 SLAIN1Q8ND83 568 aa17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 SH3RF3Q8TEJ3 882 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 SH3TC2Q8TF17 1288 aa17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 BIN2Q9UBW5 565 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-209ENST00000478349 RBBP6Q7Z6E9 1792 aaKnown RBP17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 USP17L5A8MUK1 530 aa17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 HMMRO75330 724 aa17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 ASNSP08243 561 aa17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 CAP2P40123 477 aa17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 TNRC18O15417 2968 aaPredicted RBP17.63■□□□□ 0.41
SMARCE1-209ENST00000478349 HTTP42858 3142 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 TNPO2O14787 897 aaKnown RBP17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 CYP2E1P05181 493 aaPredicted RBP17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 RLBP1P12271 317 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 CAPN2P17655 700 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 ZAP70P43403 619 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 GCLCP48506 637 aaPredicted RBP17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 CEP85Q6P2H3 762 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 FLT1P17948 1338 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 DOCK1Q14185 1865 aa17.62■□□□□ 0.41
SMARCE1-209ENST00000478349 FAM196BA6NMK8 535 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 ECM2O94769 699 aaPredicted RBP17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 SPP2Q13103 211 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 TGFBRAP1Q8WUH2 860 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 COA7Q96BR5 231 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 TMOD4Q9NZQ9 345 aa17.61■□□□□ 0.41
SMARCE1-209ENST00000478349 CYP7A1P22680 504 aa17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 PRKCZQ05513 592 aa17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 TTF1Q15361 905 aaPredicted RBP17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 AACSQ86V21 672 aa17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 MAPKAPK5Q8IW41 473 aa17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 CCDC8Q9H0W5 538 aaPredicted RBP17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
SMARCE1-209ENST00000478349 HMGCS2P54868 508 aa17.59■□□□□ 0.41
SMARCE1-209ENST00000478349 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
SMARCE1-209ENST00000478349 EAF2Q96CJ1 260 aaPredicted RBP17.59■□□□□ 0.41
SMARCE1-209ENST00000478349 WDR18Q9BV38 432 aa17.59■□□□□ 0.41
SMARCE1-209ENST00000478349 C19orf81C9J6K1 198 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 CTGFP29279 349 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 USP5P45974 858 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 IRX3P78415 501 aaPredicted RBP17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 IRF5Q13568 498 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 SH3D19Q5HYK7 790 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 PXYLP1Q8TE99 480 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 GTF3C2Q8WUA4 911 aaPredicted RBP17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 RNF208Q9H0X6 261 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 PIH1D3Q9NQM4 214 aaKnown RBP17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 EXOC6BQ9Y2D4 811 aa17.58■□□□□ 0.4
SMARCE1-209ENST00000478349 ADCY3O60266 1144 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 GJB1P08034 283 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 TREML2Q5T2D2 321 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 TTC6Q86TZ1 520 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 METTL16Q86W50 562 aaKnown RBP17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
SMARCE1-209ENST00000478349 KIAA0100Q14667 2235 aaKnown RBP17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 SLURP2P0DP57 97 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 CCL5P13501 91 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 GJA8P48165 433 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 FLT3LGP49771 235 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 BACE1P56817 501 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 MTMR2Q13614 643 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 MAGEB6Q8N7X4 407 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 HTATIP2Q9BUP3 242 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 PCDH10Q9P2E7 1040 aa17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
SMARCE1-209ENST00000478349 PALD1Q9ULE6 856 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms