RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 PPP2R3AQ06190 1150 aa7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 DBX2Q6ZNG2 339 aa7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 CCDC74AQ96AQ1 378 aa7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 CARS2Q9HA77 564 aaKnown RBP7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 PARD6AQ9NPB6 346 aa7.22□□□□□ -1.25
NCKAP1-204ENST00000477988 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 LINC00310P59036 64 aa7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 ORC1Q13415 861 aa7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 PDZD3Q86UT5 571 aa7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
NCKAP1-204ENST00000477988 NUAK1O60285 661 aa7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 FOXD2O60548 495 aaPredicted RBP7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 ZNF157P51786 506 aaPredicted RBP7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 ERVK-24P63145 666 aa7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 SSU72Q9NP77 194 aaKnown RBP7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 TMEM39AQ9NV64 488 aa7.2□□□□□ -1.26
NCKAP1-204ENST00000477988 ZC3H12AQ5D1E8 599 aaKnown RBP7.19□□□□□ -1.26
NCKAP1-204ENST00000477988 GLYCTKQ8IVS8 523 aa7.19□□□□□ -1.26
NCKAP1-204ENST00000477988 PRDM10Q9NQV6 1147 aa7.19□□□□□ -1.26
NCKAP1-204ENST00000477988 SEMA3GQ9NS98 782 aa7.19□□□□□ -1.26
NCKAP1-204ENST00000477988 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
NCKAP1-204ENST00000477988 A0A0G2JLL6 359 aaPredicted RBP7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 EIF1AYO14602 144 aaKnown RBP7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 SRFP11831 508 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 GRM2Q14416 872 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 B4GALNT3Q6L9W6 998 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 DTHD1Q6ZMT9 781 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 KCNB2Q92953 911 aa7.18□□□□□ -1.26
NCKAP1-204ENST00000477988 H3BRB1 525 aa7.17□□□□□ -1.26
NCKAP1-204ENST00000477988 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
NCKAP1-204ENST00000477988 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
NCKAP1-204ENST00000477988 TUT1Q9H6E5 874 aaKnown RBP7.17□□□□□ -1.26
NCKAP1-204ENST00000477988 GPN3Q9UHW5 284 aaPredicted RBP7.17□□□□□ -1.26
NCKAP1-204ENST00000477988 GNAT3A8MTJ3 354 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 EOMESO95936 686 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 KCNN1Q92952 543 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 EMILIN2Q9BXX0 1053 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 IRF2BPLQ9H1B7 796 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
NCKAP1-204ENST00000477988 ARID3CA6NKF2 412 aa7.15□□□□□ -1.26
NCKAP1-204ENST00000477988 IGHA2P01877 340 aa7.15□□□□□ -1.26
NCKAP1-204ENST00000477988 ARNTP27540 789 aa7.15□□□□□ -1.26
NCKAP1-204ENST00000477988 SULF2Q8IWU5 870 aa7.15□□□□□ -1.26
NCKAP1-204ENST00000477988 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
NCKAP1-204ENST00000477988 NME2P22392 152 aa7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 ALKBH8Q96BT7 664 aaKnown RBP7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 HSPA12BQ96MM6 686 aa7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 NIF3L1Q9GZT8 377 aa7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 CACNA2D2Q9NY47 1150 aa7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 MAPK8IP1Q9UQF2 711 aa7.14□□□□□ -1.27
NCKAP1-204ENST00000477988 GPR182O15218 404 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 SYN1P17600 705 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 NTF4P34130 210 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 FCGRTP55899 365 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 CCDC82Q8N4S0 544 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 ABHD4Q8TB40 342 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 DMRTB1Q96MA1 342 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 KCNC2Q96PR1 638 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 FOXQ1Q9C009 403 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 ZCCHC4Q9H5U6 513 aa7.13□□□□□ -1.27
NCKAP1-204ENST00000477988 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 BMP7P18075 431 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 SERPINB4P48594 390 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 MAP1SQ66K74 1059 aaPredicted RBP7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 GPBAR1Q8TDU6 330 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 ALPK1Q96QP1 1244 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 PRDM5Q9NQX1 630 aaPredicted RBP7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 NLRP2Q9NX02 1062 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 USTQ9Y2C2 406 aa7.12□□□□□ -1.27
NCKAP1-204ENST00000477988 C22orf34Q6ZV56 151 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 GGNQ86UU5 652 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 KCT2Q8NC54 265 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 TMC1Q8TDI8 760 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 STK35Q8TDR2 534 aa7.11□□□□□ -1.27
NCKAP1-204ENST00000477988 FANCGO15287 622 aa7.1□□□□□ -1.27
NCKAP1-204ENST00000477988 RING1Q06587 406 aa7.1□□□□□ -1.27
NCKAP1-204ENST00000477988 ACSBG1Q96GR2 724 aa7.1□□□□□ -1.27
NCKAP1-204ENST00000477988 PRR33A8MZF0 331 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 RAC2P15153 192 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 NFKB2Q00653 900 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 NFIXQ14938 502 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 BAHD1Q8TBE0 780 aaPredicted RBP7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 RBCK1Q9BYM8 510 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 BCO2Q9BYV7 579 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 RTEL1Q9NZ71 1219 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
NCKAP1-204ENST00000477988 PPM1JQ5JR12 505 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 SCARA3Q6AZY7 606 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 CDC37L1Q7L3B6 337 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
NCKAP1-204ENST00000477988 MARCH10Q8NA82 808 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms