RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 SIPA1L3O60292 1781 aaPredicted RBP8.17□□□□□ -1.1
LINC00173-202ENST00000477702 LGR5O75473 907 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 DGAT1O75907 488 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 NTSR2O95665 410 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 ADH1AP07327 375 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 BMP1P13497 986 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 FKBP1BP68106 108 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 SCARF1Q14162 830 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 TRIM50Q86XT4 487 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 RTL9Q8NET4 1388 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 TPCN2Q8NHX9 752 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 GAS2L2Q8NHY3 880 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 CD99L2Q8TCZ2 262 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
LINC00173-202ENST00000477702 IRX2Q9BZI1 471 aaPredicted RBP8.16□□□□□ -1.1
LINC00173-202ENST00000477702 ZNF395Q9H8N7 513 aaPredicted RBP8.16□□□□□ -1.1
LINC00173-202ENST00000477702 MAP3K15Q6ZN16 1313 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 SFI1A8K8P3 1242 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 ERVV-1B6SEH8 477 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 U2SURPO15042 1029 aaKnown RBP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 DIAPH1O60610 1272 aaKnown RBP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 BBOX1O75936 387 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 ATG7O95352 703 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 RPS12P25398 132 aaKnown RBP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 SREBF2Q12772 1141 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 DPYDQ12882 1025 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 CCDC102BQ68D86 513 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 KIF6Q6ZMV9 814 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 MEIOBQ8N635 442 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 ARHGEF10LQ9HCE6 1279 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 DACH1Q9UI36 760 aa8.15□□□□□ -1.1
LINC00173-202ENST00000477702 NOVA2Q9UNW9 492 aaKnown RBP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 RRP7AQ9Y3A4 280 aaKnown RBP8.15□□□□□ -1.1
LINC00173-202ENST00000477702 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
LINC00173-202ENST00000477702 CEMIPQ8WUJ3 1361 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 FAM196BA6NMK8 535 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 TMEM229AB2RXF0 380 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 ECE2O60344 883 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
LINC00173-202ENST00000477702 MYL6BP14649 208 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 PTPN12Q05209 780 aaKnown RBP8.14□□□□□ -1.11
LINC00173-202ENST00000477702 PRKG1Q13976 671 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 SLC4A8Q2Y0W8 1093 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF34Q8IZ26 560 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 RETREG2Q8NC44 543 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 CFHR5Q9BXR6 569 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 ETNK1Q9HBU6 452 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 DUOX1Q9NRD9 1551 aa8.14□□□□□ -1.11
LINC00173-202ENST00000477702 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 NUP98P52948 1817 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 PITPNM2Q9BZ72 1349 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 WTIPA6NIX2 430 aaPredicted RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 SOX1O00570 391 aaPredicted RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 PTGIRP43119 386 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 ATP1A2P50993 1020 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 GDF10P55107 478 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 CAP1Q01518 475 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 DDX46Q7L014 1031 aaKnown RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 MCM10Q7L590 875 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 PPP1R42Q7Z4L9 355 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 ANKMY2Q8IV38 441 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 SIX5Q8N196 739 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 DPF3Q92784 378 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF333Q96JL9 665 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 PHACTR3Q96KR7 559 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 SERTAD1Q9UHV2 236 aa8.13□□□□□ -1.11
LINC00173-202ENST00000477702 NSFL1CQ9UNZ2 370 aaKnown RBP8.13□□□□□ -1.11
LINC00173-202ENST00000477702 A0A1W2PRU2 124 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 LCE2BO14633 110 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 IL2RAP01589 272 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 TCIRG1Q13488 830 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 GRAPQ13588 217 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 DCTN1Q14203 1278 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 SLC10A5Q5PT55 438 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 C6orf118Q5T5N4 469 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 GRAPLQ8TC17 118 aaPredicted RBP8.12□□□□□ -1.11
LINC00173-202ENST00000477702 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 UTP14AQ9BVJ6 771 aaKnown RBP8.12□□□□□ -1.11
LINC00173-202ENST00000477702 AAASQ9NRG9 546 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF358Q9NW07 568 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 POLLQ9UGP5 575 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 KNSTRNQ9Y448 316 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 UNC80Q8N2C7 3258 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF609O15014 1411 aa8.12□□□□□ -1.11
LINC00173-202ENST00000477702 TAF1P21675 1872 aa8.11□□□□□ -1.11
LINC00173-202ENST00000477702 MEN1O00255 615 aa8.11□□□□□ -1.11
LINC00173-202ENST00000477702 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
LINC00173-202ENST00000477702 AXIN1O15169 862 aa8.11□□□□□ -1.11
LINC00173-202ENST00000477702 VIL1P09327 827 aaKnown RBP8.11□□□□□ -1.11
LINC00173-202ENST00000477702 ZNF280AP59817 542 aaPredicted RBP8.11□□□□□ -1.11
LINC00173-202ENST00000477702 GPSM2P81274 684 aa8.11□□□□□ -1.11
LINC00173-202ENST00000477702 SLC9C1Q4G0N8 1177 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms