RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ACAD11Q709F0 780 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 ABTB2Q8N961 1025 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 SHKBP1Q8TBC3 707 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
CKS1B-207ENST00000477676 MUC3BQ9H195 1237 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 KCNK4Q9NYG8 393 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
CKS1B-207ENST00000477676 TUBGCP6Q96RT7 1819 aa6.69□□□□□ -1.34
CKS1B-207ENST00000477676 CRB1P82279 1406 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 PPIP5K1Q6PFW1 1433 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 FAM196BA6NMK8 535 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 LINC01387J3KSC0 135 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 KCNQ2O43526 872 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 MMP20O60882 483 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 LGR5O75473 907 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 EGFRP00533 1210 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 PSAPP07602 524 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 YY1P25490 414 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 CD68P34810 354 aaPredicted RBP6.68□□□□□ -1.34
CKS1B-207ENST00000477676 EVA1CP58658 441 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 DPYDQ12882 1025 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 DGKZQ13574 1117 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 CLEC10AQ8IUN9 316 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 ANKMY2Q8IV38 441 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 MYRFLQ96LU7 910 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 BTAF1O14981 1849 aa6.68□□□□□ -1.34
CKS1B-207ENST00000477676 USP6P35125 1406 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 LTN1O94822 1766 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 NFAT5O94916 1531 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 XYLBO75191 536 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 HOXA10P31260 410 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-207ENST00000477676 TMEM132AQ24JP5 1023 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 KIAA1211Q6ZU35 1233 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 POU5F2Q8N7G0 328 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-207ENST00000477676 FAM83CQ9BQN1 747 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 PPP1R12CQ9BZL4 782 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 RBSNQ9H1K0 784 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 THRAP3Q9Y2W1 955 aaKnown RBP6.67□□□□□ -1.34
CKS1B-207ENST00000477676 PAPPAQ13219 1627 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 TRPM1Q7Z4N2 1603 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 NHSQ6T4R5 1651 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 AATKQ6ZMQ8 1374 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 COL24A1Q17RW2 1714 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 MON2Q7Z3U7 1717 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 OVOS2A0A0G2JMS6 1433 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 OVOS2A0A0J9YW53 1432 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 OVOS2Q6IE36 1432 aa6.67□□□□□ -1.34
CKS1B-207ENST00000477676 USP54Q70EL1 1684 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 PLSCR1O15162 318 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 PTK7Q13308 1070 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 ERICH6Q7L0X2 663 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 NLRP13Q86W25 1043 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 FAM20CQ8IXL6 584 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 SPON1Q9HCB6 807 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 RGPD2P0DJD1 1756 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 NINLQ9Y2I6 1382 aa6.66□□□□□ -1.34
CKS1B-207ENST00000477676 WDR64B1ANS9 1081 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L15C9J2P7 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L10C9JJH3 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L13C9JLJ4 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L12C9JPN9 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L11C9JVI0 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L21D6R901 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L18D6R9N7 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L22D6RA61 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L17D6RBQ6 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L19D6RCP7 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L20D6RJB6 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 TM4SF5O14894 197 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 HOXD8P13378 290 aaPredicted RBP6.65□□□□□ -1.34
CKS1B-207ENST00000477676 LMOD1P29536 600 aaPredicted RBP6.65□□□□□ -1.34
CKS1B-207ENST00000477676 USP17L24Q0WX57 530 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 C11orf91Q3C1V1 193 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 TXNDC11Q6PKC3 985 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.34
CKS1B-207ENST00000477676 FAM200AQ8TCP9 573 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 CLUAP1Q96AJ1 413 aa6.65□□□□□ -1.34
CKS1B-207ENST00000477676 CENPJQ9HC77 1338 aaPredicted RBP6.65□□□□□ -1.35
CKS1B-207ENST00000477676 BCL9O00512 1426 aa6.65□□□□□ -1.35
CKS1B-207ENST00000477676 QSER1Q2KHR3 1735 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 ZBTB7CA1YPR0 619 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 ZBTB7AO95365 584 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 RFX1P22670 979 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 SOX18P35713 384 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 SRPK2P78362 688 aaKnown RBP6.64□□□□□ -1.35
CKS1B-207ENST00000477676 DDB1Q16531 1140 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 BEND4Q6ZU67 534 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 ARHGEF25Q86VW2 580 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 ASIC4Q96FT7 647 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 WDR17Q8IZU2 1322 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 BRD4O60885 1362 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-207ENST00000477676 CPSF1Q10570 1443 aaKnown RBP6.64□□□□□ -1.35
CKS1B-207ENST00000477676 SHANK3Q9BYB0 1731 aa6.64□□□□□ -1.35
CKS1B-207ENST00000477676 A6NJR5 290 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 BMP3P12645 472 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 DUOXA2Q1HG44 320 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 CRTC2Q53ET0 693 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms