RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 AACSQ86V21 672 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 CARD6Q9BX69 1037 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 IRX2Q9BZI1 471 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
RTFDC1-207ENST00000477573 CASP7P55210 303 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 PLCB4Q15147 1175 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 SPATA21Q7Z572 469 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 OR8K1Q8NGG5 319 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 SLX1AQ9BQ83 275 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 CD248Q9HCU0 757 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 ZSCAN9O15535 394 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 AHCYL1O43865 530 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 SASH1O94885 1247 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 ZSCAN22P10073 491 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 TXLNAP40222 546 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 TRIM28Q13263 835 aaKnown RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 TCIRG1Q13488 830 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 BRAPQ7Z569 592 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 ZBTB10Q96DT7 871 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 LZTS2Q9BRK4 669 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 OSBPL5Q9H0X9 879 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 SIL1Q9H173 461 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 ZNF330Q9Y3S2 320 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 CAPN7Q9Y6W3 813 aa14.37□□□□□ -0.11
RTFDC1-207ENST00000477573 BEND6Q5SZJ8 279 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 CEP85LQ5SZL2 805 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 MFN1Q8IWA4 741 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 CCDC150Q8NCX0 1101 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 AFAP1L1Q8TED9 768 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 GOLGA1Q92805 767 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 FESP07332 822 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 NEK4P51957 841 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 SMTNP53814 917 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 SDCCAG8Q86SQ7 713 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 EZH1Q92800 747 aaPredicted RBP14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 IQCGQ9H095 443 aaKnown RBP14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 RMI1Q9H9A7 625 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 JCADQ9P266 1359 aa14.36□□□□□ -0.11
RTFDC1-207ENST00000477573 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 ARHGAP25P42331 645 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 ZNF165P49910 485 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 PTPN12Q05209 780 aaKnown RBP14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 MYBPC2Q14324 1141 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 RASA3Q14644 834 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 NAA25Q14CX7 972 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 LMBR1LQ6UX01 489 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 UNC5CLQ8IV45 518 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 SPDL1Q96EA4 605 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 KLC4Q9NSK0 619 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 PARP3Q9Y6F1 533 aa14.35□□□□□ -0.11
RTFDC1-207ENST00000477573 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 TUBBP07437 444 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 ALDH1B1P30837 517 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 RFX5P48382 616 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 SNX1Q13596 522 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 OSBPL9Q96SU4 736 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 GBP3Q9H0R5 595 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 CHMP3Q9Y3E7 222 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 GOLGA6L19H0YKK7 550 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 URI1O94763 535 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 PYGLP06737 847 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 FOXO4P98177 505 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 LAMB3Q13751 1172 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 IQCB1Q15051 598 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 HOMER1Q86YM7 354 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 RUFY2Q8WXA3 655 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 RSRC1Q96IZ7 334 aaKnown RBP14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 ANO2Q9NQ90 1003 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 RGL1Q9NZL6 768 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 RAB21Q9UL25 225 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 L1RE1Q9UN81 338 aa14.34□□□□□ -0.11
RTFDC1-207ENST00000477573 SHTN1A0MZ66 631 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 SF3B2Q13435 895 aaKnown RBP14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 ARID5BQ14865 1188 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 HOOK2Q96ED9 719 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 IL17RAQ96F46 866 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 NGLY1Q96IV0 654 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 SUN2Q9UH99 717 aa14.33□□□□□ -0.11
RTFDC1-207ENST00000477573 TJP1Q07157 1748 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 HIP1O00291 1037 aa14.33□□□□□ -0.12
RTFDC1-207ENST00000477573 MAP4K4O95819 1239 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms