RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 A0A1B0GUL6 1792 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 LOC102724428A0A0B4J2F2 783 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 MAGEB6P1A0A0J9YX57 407 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 PRPF3O43395 683 aaKnown RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 FGRP09769 529 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 PTPREP23469 700 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CALML3P27482 149 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 KIF5BP33176 963 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 ATP6V1AP38606 617 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CRKLP46109 303 aaKnown RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 SIK1P57059 783 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 GUCY1B3Q02153 619 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 TUBB2AQ13885 445 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 SLFNL1Q499Z3 407 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 RC3H1Q5TC82 1133 aaKnown RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 KRBA2Q6ZNG9 492 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CYB5R4Q7L1T6 521 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 MICU3Q86XE3 530 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CREBRFQ8IUR6 639 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 NUTM2AQ8IVF1 878 aaPredicted RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 ANKRD7Q92527 254 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 TUBB2BQ9BVA1 445 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 SLC26A6Q9BXS9 759 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 DNAJC5Q9H3Z4 198 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 ZNF287Q9HBT7 754 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 ATP8A2Q9NTI2 1148 aa9.61□□□□□ -0.87
PTPRD-209ENST00000477552 SRPRBQ9Y5M8 271 aaKnown RBP9.61□□□□□ -0.87
PTPRD-209ENST00000477552 CNTNAP4Q9C0A0 1308 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 TRIM75PA6NK02 468 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 ORC4O43929 436 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 NTSR2O95665 410 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 CHGBP05060 677 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 GNAQP50148 359 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 PPARAQ07869 468 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 SUSD4Q5VX71 490 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 GALNT17Q6IS24 598 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 INTS5Q6P9B9 1019 aaKnown RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 AMOTL1Q8IY63 956 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 SMAP1Q8IYB5 467 aaPredicted RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 CCAR2Q8N163 923 aaKnown RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 ENOX1Q8TC92 643 aaKnown RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 SYTL4Q96C24 671 aaPredicted RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 ERO1AQ96HE7 468 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 NAA15Q9BXJ9 866 aaKnown RBP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 SH3GLB2Q9NR46 395 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 AATFQ9NY61 560 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 WWC3Q9ULE0 1092 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
PTPRD-209ENST00000477552 LAMB1P07942 1786 aa9.6□□□□□ -0.87
PTPRD-209ENST00000477552 SCN7AQ01118 1682 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 MYH2Q9UKX2 1941 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 RIOK3O14730 519 aaKnown RBP9.59□□□□□ -0.87
PTPRD-209ENST00000477552 SERPINC1P01008 464 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 MYL1P05976 194 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 CYP7A1P22680 504 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 UBASH3AP57075 661 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 FANCCQ00597 558 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 CHRNDQ07001 517 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 PDE4BQ07343 736 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 SBK1Q52WX2 424 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 DIS3L2Q8IYB7 885 aaKnown RBP9.59□□□□□ -0.87
PTPRD-209ENST00000477552 ZNF654Q8IZM8 581 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 SMARCE1Q969G3 411 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
PTPRD-209ENST00000477552 SLC4A9Q96Q91 983 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 GSDMAQ96QA5 445 aa9.59□□□□□ -0.87
PTPRD-209ENST00000477552 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
PTPRD-209ENST00000477552 ARPP21Q9UBL0 812 aaPredicted RBP9.59□□□□□ -0.87
PTPRD-209ENST00000477552 NEDD4P46934 1319 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 ARHGAP6O43182 974 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 STX10O60499 249 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 PRKCSHP14314 528 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 CDC27P30260 824 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 KRT2P35908 639 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 PPP1R2P41236 205 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 FOSBP53539 338 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 GSTO1P78417 241 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 CCZ1BP86790 482 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 CCZ1P86791 482 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 SPAG1Q07617 926 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 POSTNQ15063 836 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 DPCR1Q3MIW9 517 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 FILIP1LQ4L180 1135 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 IFIT1BQ5T764 474 aaKnown RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 ARL6IP4Q66PJ3 421 aaKnown RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 PI16Q6UXB8 463 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 FILIP1Q7Z7B0 1213 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 ANKRD20A12PQ8NF67 263 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 CTCFLQ8NI51 663 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 C16orf45Q96MC5 204 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 ZSCAN10Q96SZ4 725 aaPredicted RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 LZTS2Q9BRK4 669 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 XPO4Q9C0E2 1151 aaKnown RBP9.58□□□□□ -0.88
PTPRD-209ENST00000477552 ARMT1Q9H993 441 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
PTPRD-209ENST00000477552 EPB41L4AQ9HCS5 686 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms