RNA–Protein interactions for RNA: ENST00000477440.6

ARHGEF3-208, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-208ENST00000477440 ARMT1Q9H993 441 aa30.66■■■□□ 2.5
ARHGEF3-208ENST00000477440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.66■■■□□ 2.5
ARHGEF3-208ENST00000477440 BAZ2AQ9UIF9 1905 aaKnown RBP30.66■■■□□ 2.5
ARHGEF3-208ENST00000477440 CASP8AP2Q9UKL3 1982 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 MBD4O95243 580 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 PDE1AP54750 535 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 NUCB1Q02818 461 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 CHD1LQ86WJ1 897 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 CRNKL1Q9BZJ0 848 aaKnown RBP30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 PI4KBQ9UBF8 816 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 STAP2Q9UGK3 403 aa30.65■■■□□ 2.5
ARHGEF3-208ENST00000477440 COL13A1Q5TAT6 717 aaPredicted RBP30.64■■■□□ 2.5
ARHGEF3-208ENST00000477440 MS4A4AQ96JQ5 239 aa30.64■■■□□ 2.5
ARHGEF3-208ENST00000477440 IRF6O14896 467 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 PPIL2Q13356 520 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 SCYL3Q8IZE3 742 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 SDR42E1Q8WUS8 393 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 DNAJC18Q9H819 358 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 PRDM10Q9NQV6 1147 aa30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 HERC5Q9UII4 1024 aaKnown RBP30.63■■■□□ 2.49
ARHGEF3-208ENST00000477440 IGF2BP3O00425 579 aaKnown RBP eCLIP30.62■■■□□ 2.49
ARHGEF3-208ENST00000477440 INHBEP58166 350 aa30.62■■■□□ 2.49
ARHGEF3-208ENST00000477440 PPATQ06203 517 aa30.62■■■□□ 2.49
ARHGEF3-208ENST00000477440 PUS7LQ9H0K6 701 aaKnown RBP30.62■■■□□ 2.49
ARHGEF3-208ENST00000477440 PTPRFP10586 1907 aa30.62■■■□□ 2.49
ARHGEF3-208ENST00000477440 CTNND1O60716 968 aaKnown RBP30.61■■■□□ 2.49
ARHGEF3-208ENST00000477440 IFNL1Q8IU54 200 aa30.61■■■□□ 2.49
ARHGEF3-208ENST00000477440 TESPA1A2RU30 521 aaPredicted RBP30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 PRKAB2O43741 272 aa30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 HLA-DOAP06340 250 aa30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 GTF2A2P52657 109 aa30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 RRP1BQ14684 758 aaKnown RBP30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 METTL16Q86W50 562 aaKnown RBP30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 BRI3BPQ8WY22 251 aa30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 PTPN18Q99952 460 aa30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.6■■■□□ 2.49
ARHGEF3-208ENST00000477440 CCL15-CCL14A0A0B4J2E2 113 aa30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 RNF113AO15541 343 aaKnown RBP30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 CCL15Q16663 113 aa30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 CRACR2BQ8N4Y2 399 aaPredicted RBP30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 FSD1Q9BTV5 496 aa30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 PICK1Q9NRD5 415 aa30.59■■■□□ 2.49
ARHGEF3-208ENST00000477440 PTPRAP18433 802 aa30.58■■■□□ 2.49
ARHGEF3-208ENST00000477440 FOXP4Q8IVH2 680 aaPredicted RBP30.58■■■□□ 2.49
ARHGEF3-208ENST00000477440 APPBP2Q92624 585 aa30.58■■■□□ 2.49
ARHGEF3-208ENST00000477440 DCP1AQ9NPI6 582 aaPredicted RBP30.58■■■□□ 2.49
ARHGEF3-208ENST00000477440 TBC1D8O95759 1140 aa30.57■■■□□ 2.48
ARHGEF3-208ENST00000477440 ZFYP08048 801 aaPredicted RBP30.57■■■□□ 2.48
ARHGEF3-208ENST00000477440 OSBP2Q969R2 916 aa30.57■■■□□ 2.48
ARHGEF3-208ENST00000477440 MYH8P13535 1937 aa30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 SNAPC2Q13487 334 aa30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 CCDC84Q86UT8 332 aaPredicted RBP30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 TRIM34Q9BYJ4 488 aa30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 MCM9Q9NXL9 1143 aa30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 KCNH4Q9UQ05 1017 aa30.56■■■□□ 2.48
ARHGEF3-208ENST00000477440 CAP2P40123 477 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 PLCD1P51178 756 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 EVX2Q03828 476 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 TTC6Q86TZ1 520 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 PLEKHM2Q8IWE5 1019 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 EHD4Q9H223 541 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 ZHX2Q9Y6X8 837 aa30.55■■■□□ 2.48
ARHGEF3-208ENST00000477440 ALDH1A1P00352 501 aa30.54■■■□□ 2.48
ARHGEF3-208ENST00000477440 POLR3DP05423 398 aaPredicted RBP30.54■■■□□ 2.48
ARHGEF3-208ENST00000477440 R3HDMLQ9H3Y0 253 aa30.54■■■□□ 2.48
ARHGEF3-208ENST00000477440 SERPINB13Q9UIV8 391 aa30.54■■■□□ 2.48
ARHGEF3-208ENST00000477440 SLC4A4Q9Y6R1 1079 aa30.54■■■□□ 2.48
ARHGEF3-208ENST00000477440 M0R2C6 588 aa30.53■■■□□ 2.48
ARHGEF3-208ENST00000477440 CETPP11597 493 aa30.53■■■□□ 2.48
ARHGEF3-208ENST00000477440 LRRFIP1Q32MZ4 808 aaKnown RBP30.53■■■□□ 2.48
ARHGEF3-208ENST00000477440 CFHR5Q9BXR6 569 aa30.53■■■□□ 2.48
ARHGEF3-208ENST00000477440 ATP8A2Q9NTI2 1148 aa30.53■■■□□ 2.48
ARHGEF3-208ENST00000477440 CYP2D6P10635 497 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 SHROOM1Q2M3G4 852 aaPredicted RBP30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 OTUD7BQ6GQQ9 843 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 FAM43AQ8N2R8 423 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 EVI5LQ96CN4 794 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 STRBPQ96SI9 672 aaKnown RBP30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 OSBPL3Q9H4L5 887 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 AFG3L2Q9Y4W6 797 aa30.52■■■□□ 2.48
ARHGEF3-208ENST00000477440 GPAA1O43292 621 aa30.51■■■□□ 2.47
ARHGEF3-208ENST00000477440 GDF11O95390 407 aa30.51■■■□□ 2.47
ARHGEF3-208ENST00000477440 JAG1P78504 1218 aa30.51■■■□□ 2.47
ARHGEF3-208ENST00000477440 SEC62Q99442 399 aaKnown RBP30.51■■■□□ 2.47
ARHGEF3-208ENST00000477440 BTBD19C9JJ37 291 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 CXCL11O14625 94 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 PDE4AP27815 886 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 MOGSQ13724 837 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 ZMYM1Q5SVZ6 1142 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 TATDN1Q6P1N9 297 aa30.49■■■□□ 2.47
ARHGEF3-208ENST00000477440 TRIM75PA6NK02 468 aa30.48■■■□□ 2.47
ARHGEF3-208ENST00000477440 GABPAQ06546 454 aa30.48■■■□□ 2.47
ARHGEF3-208ENST00000477440 CRHR2Q13324 411 aa30.48■■■□□ 2.47
ARHGEF3-208ENST00000477440 LOC285556D6RIA3 1793 aa30.48■■■□□ 2.47
ARHGEF3-208ENST00000477440 CYP2D7A0A087X1C5 515 aa30.47■■■□□ 2.47
ARHGEF3-208ENST00000477440 A0A0G2JLL6 359 aaPredicted RBP30.47■■■□□ 2.47
ARHGEF3-208ENST00000477440 SMIM22K7EJ46 135 aa30.47■■■□□ 2.47
ARHGEF3-208ENST00000477440 SHMT1P34896 483 aa30.47■■■□□ 2.47
ARHGEF3-208ENST00000477440 PRRT2Q7Z6L0 340 aaPredicted RBP30.47■■■□□ 2.47
ARHGEF3-208ENST00000477440 ZBTB21Q9ULJ3 1066 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms