RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL4A5-204ENST00000477429 SIL1Q9H173 461 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 MRS2Q9HD23 443 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 GJD2Q9UKL4 321 aa12.24□□□□□ -0.45
COL4A5-204ENST00000477429 ARIH1Q9Y4X5 557 aaPredicted RBP12.24□□□□□ -0.45
COL4A5-204ENST00000477429 DOCK2Q92608 1830 aa12.23□□□□□ -0.45
COL4A5-204ENST00000477429 LDHBP07195 334 aaKnown RBP12.23□□□□□ -0.45
COL4A5-204ENST00000477429 SLC5A1P13866 664 aa12.23□□□□□ -0.45
COL4A5-204ENST00000477429 BMP8BP34820 402 aa12.23□□□□□ -0.45
COL4A5-204ENST00000477429 MAFAQ8NHW3 353 aaPredicted RBP12.23□□□□□ -0.45
COL4A5-204ENST00000477429 PA2G4Q9UQ80 394 aaKnown RBP12.23□□□□□ -0.45
COL4A5-204ENST00000477429 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
COL4A5-204ENST00000477429 ZNF521Q96K83 1311 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 RHBDL3P58872 404 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 JAG1P78504 1218 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 PICALMQ13492 652 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 RASGRF1Q13972 1273 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 SHROOM1Q2M3G4 852 aaPredicted RBP12.22□□□□□ -0.45
COL4A5-204ENST00000477429 POTEEQ6S8J3 1075 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 FASTKD5Q7L8L6 764 aaKnown RBP12.22□□□□□ -0.45
COL4A5-204ENST00000477429 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 PICK1Q9NRD5 415 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 SLC45A1Q9Y2W3 748 aa12.22□□□□□ -0.45
COL4A5-204ENST00000477429 PKD1L2Q7Z442 2459 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 DOCK1Q14185 1865 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 PFASO15067 1338 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 ENTPD3O75355 529 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 MAGEA10P43363 369 aaPredicted RBP12.21□□□□□ -0.45
COL4A5-204ENST00000477429 SMCR8Q8TEV9 937 aaPredicted RBP12.21□□□□□ -0.45
COL4A5-204ENST00000477429 TRIB2Q92519 343 aa12.21□□□□□ -0.45
COL4A5-204ENST00000477429 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
COL4A5-204ENST00000477429 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
COL4A5-204ENST00000477429 BTDP43251 543 aa12.2□□□□□ -0.46
COL4A5-204ENST00000477429 TJAP1Q5JTD0 557 aa12.2□□□□□ -0.46
COL4A5-204ENST00000477429 CCDC102BQ68D86 513 aa12.2□□□□□ -0.46
COL4A5-204ENST00000477429 PI16Q6UXB8 463 aa12.2□□□□□ -0.46
COL4A5-204ENST00000477429 ZSCAN29Q8IWY8 852 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-204ENST00000477429 TXNRD2Q9NNW7 524 aa12.2□□□□□ -0.46
COL4A5-204ENST00000477429 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
COL4A5-204ENST00000477429 HMGCS2P54868 508 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 TIMM10P62072 90 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 SPP2Q13103 211 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 FAM110CQ1W6H9 321 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 NECAB2Q7Z6G3 386 aa12.19□□□□□ -0.46
COL4A5-204ENST00000477429 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
COL4A5-204ENST00000477429 ASCC2Q9H1I8 757 aaPredicted RBP12.19□□□□□ -0.46
COL4A5-204ENST00000477429 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
COL4A5-204ENST00000477429 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 MECOMQ03112 1051 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 TBC1D9Q6ZT07 1266 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 IFNLR1Q8IU57 520 aaPredicted RBP12.18□□□□□ -0.46
COL4A5-204ENST00000477429 COA7Q96BR5 231 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
COL4A5-204ENST00000477429 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 OGDHLQ9ULD0 1010 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 DENND2AQ9ULE3 1009 aa12.18□□□□□ -0.46
COL4A5-204ENST00000477429 MROH7-TTC4A0A0A0MT08 1334 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 CIAO1O76071 339 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 HMGCRP04035 888 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 COL6A1P12109 1028 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 CCL14Q16627 93 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 LRRC26Q2I0M4 334 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 TDHQ8IZJ6 230 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 CDX2Q99626 313 aaPredicted RBP12.17□□□□□ -0.46
COL4A5-204ENST00000477429 NBPF3Q9H094 633 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 C11orf49Q9H6J7 331 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
COL4A5-204ENST00000477429 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 PTPRCP08575 1304 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 GPR75-ASB3A0A0A6YYF3 556 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 TBC1D12O60347 775 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 CYP2B6P20813 491 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 CCND3P30281 292 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-204ENST00000477429 Q3C1V9 767 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-204ENST00000477429 FAM9BQ8IZU0 186 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 ANKLE1Q8NAG6 615 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 PROCA1Q8NCQ7 364 aaPredicted RBP12.16□□□□□ -0.46
COL4A5-204ENST00000477429 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL4A5-204ENST00000477429 MORF4L1Q9UBU8 362 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 HCN4Q9Y3Q4 1203 aa12.16□□□□□ -0.46
COL4A5-204ENST00000477429 SEMA3EO15041 775 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 PRKAR2AP13861 404 aaKnown RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 CAP2P40123 477 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 MDM2Q00987 491 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 CACNB2Q08289 660 aaPredicted RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 TFCP2Q12800 502 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 LHX8Q68G74 356 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 DZIP1Q86YF9 867 aaKnown RBP12.15□□□□□ -0.46
COL4A5-204ENST00000477429 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
COL4A5-204ENST00000477429 PORCNQ9H237 461 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms