RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 PTPN18Q99952 460 aa16.22■□□□□ 0.19
ACTN4-205ENST00000477174 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 IGF2BP3O00425 579 aaKnown RBP eCLIP16.21■□□□□ 0.19
ACTN4-205ENST00000477174 CXCL11O14625 94 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 HLA-DOAP06340 250 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
ACTN4-205ENST00000477174 PTPRAP18433 802 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 CCL15Q16663 113 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 TTC6Q86TZ1 520 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 BRI3BPQ8WY22 251 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 SAP30BPQ9UHR5 308 aaKnown RBP16.21■□□□□ 0.19
ACTN4-205ENST00000477174 KCNH4Q9UQ05 1017 aa16.21■□□□□ 0.19
ACTN4-205ENST00000477174 AK9Q5TCS8 1911 aa16.2■□□□□ 0.18
ACTN4-205ENST00000477174 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
ACTN4-205ENST00000477174 NUCB1Q02818 461 aa16.2■□□□□ 0.18
ACTN4-205ENST00000477174 CRACR2BQ8N4Y2 399 aaPredicted RBP16.2■□□□□ 0.18
ACTN4-205ENST00000477174 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
ACTN4-205ENST00000477174 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
ACTN4-205ENST00000477174 ZHX2Q9Y6X8 837 aa16.2■□□□□ 0.18
ACTN4-205ENST00000477174 MAST2Q6P0Q8 1798 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 FAM196BA6NMK8 535 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
ACTN4-205ENST00000477174 CAP2P40123 477 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 PDE1AP54750 535 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 SLFNL1Q499Z3 407 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 CHD1LQ86WJ1 897 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 LCORLQ8N3X6 602 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 EHD4Q9H223 541 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 ARMT1Q9H993 441 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 ATP8A2Q9NTI2 1148 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 GINM1Q9NU53 330 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
ACTN4-205ENST00000477174 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
ACTN4-205ENST00000477174 MBD4O95243 580 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
ACTN4-205ENST00000477174 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
ACTN4-205ENST00000477174 B4GALNT3Q6L9W6 998 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 TBC1D2Q9BYX2 928 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
ACTN4-205ENST00000477174 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
ACTN4-205ENST00000477174 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 SERPINB13Q9UIV8 391 aa16.18■□□□□ 0.18
ACTN4-205ENST00000477174 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 GPR25O00155 361 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 APPBP2Q92624 585 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 R3HDMLQ9H3Y0 253 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 DNAJC18Q9H819 358 aa16.17■□□□□ 0.18
ACTN4-205ENST00000477174 USP17L5A8MUK1 530 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 BTBD19C9JJ37 291 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 PRKAB2O43741 272 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 CHGBP05060 677 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 ASNSP08243 561 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 PLCD1P51178 756 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
ACTN4-205ENST00000477174 FASTKD5Q7L8L6 764 aaKnown RBP16.16■□□□□ 0.18
ACTN4-205ENST00000477174 ANKRD23Q86SG2 305 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 SDR42E1Q8WUS8 393 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 OSBP2Q969R2 916 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 EVI5LQ96CN4 794 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 STRBPQ96SI9 672 aaKnown RBP16.16■□□□□ 0.18
ACTN4-205ENST00000477174 ZFYVE28Q9HCC9 887 aa16.16■□□□□ 0.18
ACTN4-205ENST00000477174 A0A0G2JLL6 359 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-205ENST00000477174 FKTNO75072 461 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 CRHR2Q13324 411 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 MOGSQ13724 837 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 PRRT2Q7Z6L0 340 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-205ENST00000477174 ZNF280CQ8ND82 737 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 ZNF296Q8WUU4 475 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-205ENST00000477174 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 OSBPL3Q9H4L5 887 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 SLC4A4Q9Y6R1 1079 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 OTOFQ9HC10 1997 aa16.15■□□□□ 0.18
ACTN4-205ENST00000477174 GNAT2P19087 354 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 TAF1CQ15572 869 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-205ENST00000477174 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 GIMAP6Q6P9H5 292 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 WDR18Q9BV38 432 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 AS3MTQ9HBK9 375 aa16.14■□□□□ 0.17
ACTN4-205ENST00000477174 TRIM75PA6NK02 468 aa16.13■□□□□ 0.17
ACTN4-205ENST00000477174 GABPAQ06546 454 aa16.13■□□□□ 0.17
ACTN4-205ENST00000477174 SPP2Q13103 211 aa16.13■□□□□ 0.17
ACTN4-205ENST00000477174 CERKLQ49MI3 558 aaPredicted RBP16.13■□□□□ 0.17
ACTN4-205ENST00000477174 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
ACTN4-205ENST00000477174 USP17L12C9JPN9 530 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 USP17L21D6R901 530 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 PDHXO00330 501 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 TLR2O60603 784 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 JAG1P78504 1218 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 ZMYM1Q5SVZ6 1142 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms