RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 SYNGAP1Q96PV0 1343 aa9.28□□□□□ -0.92
PRPF3-205ENST00000476970 ATRNL1Q5VV63 1379 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 C19orf67A6NJJ6 358 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 PHF20L1A8MW92 1017 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 CTNND1O60716 968 aaKnown RBP9.27□□□□□ -0.93
PRPF3-205ENST00000476970 CYP2B6P20813 491 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 SHHQ15465 462 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 CDC42EP5Q6NZY7 148 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 TBC1D2Q9BYX2 928 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 SENP6Q9GZR1 1112 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-205ENST00000476970 THEGQ9P2T0 379 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 DAGLAQ9Y4D2 1042 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 KIF16BQ96L93 1317 aa9.27□□□□□ -0.93
PRPF3-205ENST00000476970 MSCO60682 206 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 RGS2P41220 211 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 CACNB2Q08289 660 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-205ENST00000476970 NFIAQ12857 509 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 TREML2Q5T2D2 321 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 WDR66Q8TBY9 1149 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 ADAMTS19Q8TE59 1207 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 UHRF1Q96T88 793 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-205ENST00000476970 MORF4L1Q9UBU8 362 aa9.26□□□□□ -0.93
PRPF3-205ENST00000476970 MUC6Q6W4X9 2439 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 ENTPD3O75355 529 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 MAPK4P31152 587 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 RTP1P59025 263 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 IRX3P78415 501 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 METTL24Q5JXM2 366 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 C9orf50Q5SZB4 431 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 LHX8Q68G74 356 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 G2E3Q7L622 706 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 ZSCAN29Q8IWY8 852 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 CCAR1Q8IX12 1150 aaKnown RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 TSPYL6Q8N831 410 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 USP38Q8NB14 1042 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 GAS2L1Q99501 681 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 APBA2Q99767 749 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 PRDM5Q9NQX1 630 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 USP40Q9NVE5 1235 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 FAM198AQ9UFP1 575 aa9.25□□□□□ -0.93
PRPF3-205ENST00000476970 MYBBP1AQ9BQG0 1328 aaKnown RBP9.25□□□□□ -0.93
PRPF3-205ENST00000476970 GRM8O00222 908 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 DNM1LO00429 736 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 IFIT1P09914 478 aaKnown RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 CCND3P30281 292 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 RGS3P49796 1198 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 ATN1P54259 1190 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 MRPS5P82675 430 aaKnown RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 TWISTNBQ3B726 338 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 GTF3C2Q8WUA4 911 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 RNPC3Q96LT9 517 aaKnown RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 ASB2Q96Q27 587 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 IDI2Q9BXS1 227 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 ASCC2Q9H1I8 757 aaPredicted RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 CWC22Q9HCG8 908 aaKnown RBP9.24□□□□□ -0.93
PRPF3-205ENST00000476970 ATP11BQ9Y2G3 1177 aa9.24□□□□□ -0.93
PRPF3-205ENST00000476970 LDHBP07195 334 aaKnown RBP9.23□□□□□ -0.93
PRPF3-205ENST00000476970 HMGCS2P54868 508 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 MAP3K10Q02779 954 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 DIXDC1Q155Q3 683 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 EPHA10Q5JZY3 1008 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 MFSD14CQ5VZR4 134 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 ZNF280CQ8ND82 737 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 GPRC5AQ8NFJ5 357 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 LPAR1Q92633 364 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
PRPF3-205ENST00000476970 OSBPL5Q9H0X9 879 aaPredicted RBP9.23□□□□□ -0.93
PRPF3-205ENST00000476970 AS3MTQ9HBK9 375 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 C9orf78Q9NZ63 289 aaPredicted RBP9.23□□□□□ -0.93
PRPF3-205ENST00000476970 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 RFX7Q2KHR2 1363 aa9.23□□□□□ -0.93
PRPF3-205ENST00000476970 KBTBD13C9JR72 458 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 GLRX3O76003 335 aaKnown RBP9.22□□□□□ -0.93
PRPF3-205ENST00000476970 PDE8BO95263 885 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 DNAJB2P25686 324 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 SPP2Q13103 211 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 GRIN2CQ14957 1233 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 PUM3Q15397 648 aaKnown RBP9.22□□□□□ -0.93
PRPF3-205ENST00000476970 AKNAD1Q5T1N1 836 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 BADQ92934 168 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 DDX20Q9UHI6 824 aaKnown RBP9.22□□□□□ -0.93
PRPF3-205ENST00000476970 TCF20Q9UGU0 1960 aaKnown RBP9.22□□□□□ -0.93
PRPF3-205ENST00000476970 UTYO14607 1347 aa9.22□□□□□ -0.93
PRPF3-205ENST00000476970 APAF1O14727 1248 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 TBC1D12O60347 775 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 SLC5A1P13866 664 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 PRDX5P30044 214 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 SH3D19Q5HYK7 790 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 GPR142Q7Z601 462 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 PLEKHH3Q7Z736 793 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.94
PRPF3-205ENST00000476970 ZFPM1Q8IX07 1006 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 SLF2Q8IX21 1173 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 ARRDC4Q8NCT1 418 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 USP6NLQ92738 828 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 TSR2Q969E8 191 aaKnown RBP9.21□□□□□ -0.94
PRPF3-205ENST00000476970 TSPYL2Q9H2G4 693 aaPredicted RBP9.21□□□□□ -0.94
PRPF3-205ENST00000476970 ZNF576Q9H609 170 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 PDLIM7Q9NR12 457 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms