RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SYN1P17600 705 aa14.18□□□□□ -0.14
BRCA1-213ENST00000476777 TRIM32Q13049 653 aa14.18□□□□□ -0.14
BRCA1-213ENST00000476777 TDHQ8IZJ6 230 aa14.18□□□□□ -0.14
BRCA1-213ENST00000476777 PROCA1Q8NCQ7 364 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-213ENST00000476777 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
BRCA1-213ENST00000476777 PTPRCP08575 1304 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 TBC1D12O60347 775 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 CIAO1O76071 339 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 GCLCP48506 637 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-213ENST00000476777 ZGPATQ8N5A5 531 aaKnown RBP14.17□□□□□ -0.14
BRCA1-213ENST00000476777 SIL1Q9H173 461 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 C11orf49Q9H6J7 331 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 HMX1Q9NP08 348 aaPredicted RBP14.17□□□□□ -0.14
BRCA1-213ENST00000476777 CEP126Q9P2H0 1117 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 OGDHLQ9ULD0 1010 aa14.17□□□□□ -0.14
BRCA1-213ENST00000476777 DDX60LQ5H9U9 1706 aaKnown RBP14.16□□□□□ -0.14
BRCA1-213ENST00000476777 BTDP43251 543 aa14.16□□□□□ -0.14
BRCA1-213ENST00000476777 SPP2Q13103 211 aa14.16□□□□□ -0.14
BRCA1-213ENST00000476777 PICALMQ13492 652 aa14.16□□□□□ -0.14
BRCA1-213ENST00000476777 DZIP1Q86YF9 867 aaKnown RBP14.16□□□□□ -0.14
BRCA1-213ENST00000476777 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 ADORA1P30542 326 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 HMGCS2P54868 508 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 RHBDL3P58872 404 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 CCDC102BQ68D86 513 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 SLF2Q8IX21 1173 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 ZNF280CQ8ND82 737 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 TRIB2Q92519 343 aa14.15□□□□□ -0.14
BRCA1-213ENST00000476777 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
BRCA1-213ENST00000476777 OSBPL5Q9H0X9 879 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-213ENST00000476777 ASCC2Q9H1I8 757 aaPredicted RBP14.15□□□□□ -0.14
BRCA1-213ENST00000476777 PFASO15067 1338 aa14.15□□□□□ -0.15
BRCA1-213ENST00000476777 SPTBN5Q9NRC6 3674 aaKnown RBP14.14□□□□□ -0.15
BRCA1-213ENST00000476777 LOC285556D6RIA3 1793 aa14.14□□□□□ -0.15
BRCA1-213ENST00000476777 PLXNB2O15031 1838 aa14.14□□□□□ -0.15
BRCA1-213ENST00000476777 GPR75-ASB3A0A0A6YYF3 556 aa14.14□□□□□ -0.15
BRCA1-213ENST00000476777 COL25A1Q9BXS0 654 aaPredicted RBP14.14□□□□□ -0.15
BRCA1-213ENST00000476777 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.14□□□□□ -0.15
BRCA1-213ENST00000476777 ABCF2Q9UG63 623 aa14.14□□□□□ -0.15
BRCA1-213ENST00000476777 MROH7-TTC4A0A0A0MT08 1334 aa14.14□□□□□ -0.15
BRCA1-213ENST00000476777 PDS5AQ29RF7 1337 aaKnown RBP14.14□□□□□ -0.15
BRCA1-213ENST00000476777 COL6A1P12109 1028 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
BRCA1-213ENST00000476777 IL15P40933 162 aaPredicted RBP14.13□□□□□ -0.15
BRCA1-213ENST00000476777 PABPC4Q13310 644 aaKnown RBP eCLIP14.13□□□□□ -0.15
BRCA1-213ENST00000476777 RRP1BQ14684 758 aaKnown RBP14.13□□□□□ -0.15
BRCA1-213ENST00000476777 ZNF384Q8TF68 577 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 SSH1Q8WYL5 1049 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 TBC1D2Q9BYX2 928 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 MORF4L1Q9UBU8 362 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 ZNF521Q96K83 1311 aa14.13□□□□□ -0.15
BRCA1-213ENST00000476777 CYP2B6P20813 491 aa14.12□□□□□ -0.15
BRCA1-213ENST00000476777 CAP2P40123 477 aa14.12□□□□□ -0.15
BRCA1-213ENST00000476777 MECOMQ03112 1051 aa14.12□□□□□ -0.15
BRCA1-213ENST00000476777 SH3D19Q5HYK7 790 aa14.12□□□□□ -0.15
BRCA1-213ENST00000476777 SPTY2D1Q68D10 685 aaPredicted RBP14.12□□□□□ -0.15
BRCA1-213ENST00000476777 PA2G4Q9UQ80 394 aaKnown RBP14.12□□□□□ -0.15
BRCA1-213ENST00000476777 USP17L5A8MUK1 530 aa14.11□□□□□ -0.15
BRCA1-213ENST00000476777 XRCC5P13010 732 aaKnown RBP14.11□□□□□ -0.15
BRCA1-213ENST00000476777 CDH23Q9H251 3354 aa14.11□□□□□ -0.15
BRCA1-213ENST00000476777 NCOR1O75376 2440 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 POTEB2H3BUK9 544 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 PEX10O60683 326 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 UBTFL1P0CB47 393 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-213ENST00000476777 TIMM10P62072 90 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 CACNB2Q08289 660 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-213ENST00000476777 LRRC26Q2I0M4 334 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 LHX8Q68G74 356 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 ERICH6Q7L0X2 663 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.1□□□□□ -0.15
BRCA1-213ENST00000476777 SOCS4Q8WXH5 440 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 GUCD1Q96NT3 240 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 P2RX7Q99572 595 aaKnown RBP14.1□□□□□ -0.15
BRCA1-213ENST00000476777 NUDT12Q9BQG2 462 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 TXNRD2Q9NNW7 524 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 COPRSQ9NQ92 184 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 COL2A1P02458 1487 aaPredicted RBP14.1□□□□□ -0.15
BRCA1-213ENST00000476777 ATAD5Q96QE3 1844 aa14.1□□□□□ -0.15
BRCA1-213ENST00000476777 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-213ENST00000476777 HOXA7P31268 230 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-213ENST00000476777 BACE1P56817 501 aa14.09□□□□□ -0.15
BRCA1-213ENST00000476777 IRX3P78415 501 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-213ENST00000476777 MDM2Q00987 491 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-213ENST00000476777 FAM109BQ6ICB4 259 aaPredicted RBP14.09□□□□□ -0.15
BRCA1-213ENST00000476777 GPRC5AQ8NFJ5 357 aa14.09□□□□□ -0.15
BRCA1-213ENST00000476777 USP6NLQ92738 828 aa14.09□□□□□ -0.15
BRCA1-213ENST00000476777 WDR18Q9BV38 432 aa14.09□□□□□ -0.15
BRCA1-213ENST00000476777 ZKSCAN1P17029 563 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-213ENST00000476777 CCND3P30281 292 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-213ENST00000476777 HERVK_113P62684 666 aa14.08□□□□□ -0.16
BRCA1-213ENST00000476777 MTMR2Q13614 643 aa14.08□□□□□ -0.16
BRCA1-213ENST00000476777 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
BRCA1-213ENST00000476777 TRMT44Q8IYL2 757 aaKnown RBP14.08□□□□□ -0.16
BRCA1-213ENST00000476777 NSUN4Q96CB9 384 aaKnown RBP14.08□□□□□ -0.16
BRCA1-213ENST00000476777 XAGE2Q96GT9 111 aa14.08□□□□□ -0.16
BRCA1-213ENST00000476777 AS3MTQ9HBK9 375 aa14.08□□□□□ -0.16
BRCA1-213ENST00000476777 HERC5Q9UII4 1024 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms