RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TMEM39AQ9NV64 488 aa9.33□□□□□ -0.92
NUP58-209ENST00000476553 TMEM67Q5HYA8 995 aa9.32□□□□□ -0.92
NUP58-209ENST00000476553 DNAJC25Q9H1X3 360 aa9.32□□□□□ -0.92
NUP58-209ENST00000476553 CACNA2D2Q9NY47 1150 aa9.32□□□□□ -0.92
NUP58-209ENST00000476553 LOC105371045A0A1W2PR82 267 aa9.31□□□□□ -0.92
NUP58-209ENST00000476553 ICMTO60725 284 aa9.31□□□□□ -0.92
NUP58-209ENST00000476553 IGHA2P01877 340 aa9.31□□□□□ -0.92
NUP58-209ENST00000476553 PPP2R3AQ06190 1150 aa9.31□□□□□ -0.92
NUP58-209ENST00000476553 SULF2Q8IWU5 870 aa9.31□□□□□ -0.92
NUP58-209ENST00000476553 CARS2Q9HA77 564 aaKnown RBP9.31□□□□□ -0.92
NUP58-209ENST00000476553 GPN3Q9UHW5 284 aaPredicted RBP9.31□□□□□ -0.92
NUP58-209ENST00000476553 GNAT3A8MTJ3 354 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 GADD45BO75293 160 aaPredicted RBP9.3□□□□□ -0.92
NUP58-209ENST00000476553 EOMESO95936 686 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 GDNFP39905 211 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 PDE3BQ13370 1112 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 UBE3DQ7Z6J8 389 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 MAPK8IP1Q9UQF2 711 aa9.3□□□□□ -0.92
NUP58-209ENST00000476553 NPIPB6E9PJ23 425 aa9.29□□□□□ -0.92
NUP58-209ENST00000476553 EIF1AYO14602 144 aaKnown RBP9.29□□□□□ -0.92
NUP58-209ENST00000476553 INHBBP09529 407 aa9.29□□□□□ -0.92
NUP58-209ENST00000476553 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
NUP58-209ENST00000476553 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
NUP58-209ENST00000476553 NSUN3Q9H649 340 aaKnown RBP9.29□□□□□ -0.92
NUP58-209ENST00000476553 SEMA3GQ9NS98 782 aa9.29□□□□□ -0.92
NUP58-209ENST00000476553 ARHGAP4P98171 946 aa9.28□□□□□ -0.92
NUP58-209ENST00000476553 GPBAR1Q8TDU6 330 aa9.28□□□□□ -0.92
NUP58-209ENST00000476553 DIRC2Q96SL1 478 aa9.28□□□□□ -0.92
NUP58-209ENST00000476553 FOXQ1Q9C009 403 aa9.28□□□□□ -0.92
NUP58-209ENST00000476553 GPR182O15218 404 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 NDUFB5O43674 189 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 ARNTP27540 789 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 RING1Q06587 406 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 KCNA10Q16322 511 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 PPM1JQ5JR12 505 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 MAP1SQ66K74 1059 aaPredicted RBP9.27□□□□□ -0.93
NUP58-209ENST00000476553 DTHD1Q6ZMT9 781 aa9.27□□□□□ -0.93
NUP58-209ENST00000476553 PRDM5Q9NQX1 630 aaPredicted RBP9.27□□□□□ -0.93
NUP58-209ENST00000476553 H3BRB1 525 aa9.26□□□□□ -0.93
NUP58-209ENST00000476553 C22orf34Q6ZV56 151 aa9.26□□□□□ -0.93
NUP58-209ENST00000476553 TUT1Q9H6E5 874 aaKnown RBP9.26□□□□□ -0.93
NUP58-209ENST00000476553 ATP13A1Q9HD20 1204 aa9.26□□□□□ -0.93
NUP58-209ENST00000476553 SHROOM4Q9ULL8 1493 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 XRCC5P13010 732 aaKnown RBP9.24□□□□□ -0.93
NUP58-209ENST00000476553 NME2P22392 152 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 GLDCP23378 1020 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 FCGRTP55899 365 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 NPAS4Q8IUM7 802 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 EPS8L3Q8TE67 593 aaKnown RBP9.24□□□□□ -0.93
NUP58-209ENST00000476553 HSPA12BQ96MM6 686 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 CITED4Q96RK1 184 aa9.24□□□□□ -0.93
NUP58-209ENST00000476553 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 CTSWP56202 376 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 ATG14Q6ZNE5 492 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 ARMCX6Q7L4S7 300 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 GLYCTKQ8IVS8 523 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 EMILIN2Q9BXX0 1053 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 EPB41L4BQ9H329 900 aa9.23□□□□□ -0.93
NUP58-209ENST00000476553 PRR33A8MZF0 331 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 FANCGO15287 622 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 TMEM253P0C7T8 217 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 ZBTB37Q5TC79 503 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 CIAPIN1Q6FI81 312 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
NUP58-209ENST00000476553 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
NUP58-209ENST00000476553 CCDC120Q96HB5 630 aa9.21□□□□□ -0.94
NUP58-209ENST00000476553 KCNK12Q9HB15 430 aa9.21□□□□□ -0.94
NUP58-209ENST00000476553 DCP1AQ9NPI6 582 aaPredicted RBP9.21□□□□□ -0.94
NUP58-209ENST00000476553 JAG2Q9Y219 1238 aa9.21□□□□□ -0.94
NUP58-209ENST00000476553 TCAF2A6NFQ2 919 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 MPRIPQ6WCQ1 1025 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 MFSD4AQ8N468 514 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 C20orf173Q96LM9 149 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 ALPK1Q96QP1 1244 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 CSRNP1Q96S65 589 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 NIF3L1Q9GZT8 377 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 CSADQ9Y600 493 aa9.2□□□□□ -0.94
NUP58-209ENST00000476553 CARNS1A5YM72 827 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 ETV2O00321 342 aaPredicted RBP9.19□□□□□ -0.94
NUP58-209ENST00000476553 LRIG2O94898 1065 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 SLITRK5O94991 958 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 HOXA5P20719 270 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 SERPINB4P48594 390 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 ALKBH8Q96BT7 664 aaKnown RBP9.19□□□□□ -0.94
NUP58-209ENST00000476553 ST14Q9Y5Y6 855 aa9.19□□□□□ -0.94
NUP58-209ENST00000476553 DCDC2CA8MYV0 355 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 FAM155AB1AL88 458 aaPredicted RBP9.18□□□□□ -0.94
NUP58-209ENST00000476553 SRFP11831 508 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 LINC00310P59036 64 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 THAP5Q7Z6K1 395 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 KCT2Q8NC54 265 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 SMG5Q9UPR3 1016 aaKnown RBP9.18□□□□□ -0.94
NUP58-209ENST00000476553 CAPN6Q9Y6Q1 641 aa9.18□□□□□ -0.94
NUP58-209ENST00000476553 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 H3BS24 57 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 TRIM37O94972 964 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 CDKAL1Q5VV42 579 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 PI16Q6UXB8 463 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
NUP58-209ENST00000476553 ABHD4Q8TB40 342 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms