RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 GRIK5Q16478 980 aa14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 RRP12Q5JTH9 1297 aaKnown RBP14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 CHST3Q7LGC8 479 aa14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 TEX11Q8IYF3 940 aa14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 SH3RF3Q8TEJ3 882 aaPredicted RBP14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 TTF2Q9UNY4 1162 aaKnown RBP14.56□□□□□ -0.08
CDKAL1-203ENST00000476517 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 GOLGA8BA8MQT2 603 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 USP17L12C9JPN9 530 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 USP17L21D6R901 530 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 KDM4AO75164 1064 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 PDE4BQ07343 736 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 ST3GAL1Q11201 340 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 AOC3Q16853 763 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 TMEM67Q5HYA8 995 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 CYB5R4Q7L1T6 521 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 TEKT1Q969V4 418 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 UBAC1Q9BSL1 405 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 NMRK2Q9NPI5 230 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 MCM9Q9NXL9 1143 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 MYO3BQ8WXR4 1341 aa14.55□□□□□ -0.08
CDKAL1-203ENST00000476517 DICER1Q9UPY3 1922 aaKnown RBP14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 IFIT3O14879 490 aaKnown RBP14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 ORC4O43929 436 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 BRD1O95696 1058 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 HSPA1AP0DMV8 641 aaKnown RBP14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 HSPA1BP0DMV9 641 aaKnown RBP14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 MCM4P33991 863 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 LIFRP42702 1097 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 SCRN1Q12765 414 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 DALRD3Q5D0E6 543 aaKnown RBP14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 SYNE3Q6ZMZ3 975 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 NFXL1Q6ZNB6 911 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 CLEC17AQ6ZS10 378 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 ZNF287Q9HBT7 754 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 DAGLAQ9Y4D2 1042 aa14.54□□□□□ -0.08
CDKAL1-203ENST00000476517 CCDC69A6NI79 296 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 F8W031 263 aaPredicted RBP14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 STX6O43752 255 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 KCNA3P22001 575 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 PDIA3P30101 505 aaKnown RBP14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 CPLX2Q6PUV4 134 aaKnown RBP14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 SGMS1Q86VZ5 419 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 TMTC2Q8N394 836 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 CERS5Q8N5B7 392 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 FAM184AQ8NB25 1140 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 TGFBRAP1Q8WUH2 860 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 ATP6V1DQ9Y5K8 247 aa14.53□□□□□ -0.08
CDKAL1-203ENST00000476517 NID2Q14112 1375 aa14.52□□□□□ -0.08
CDKAL1-203ENST00000476517 FLT1P17948 1338 aa14.52□□□□□ -0.08
CDKAL1-203ENST00000476517 CPLX1O14810 134 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 CDKL5O76039 1030 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 FGRP09769 529 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 PKP1Q13835 747 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 WTAPQ15007 396 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 DACT2Q5SW24 774 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
CDKAL1-203ENST00000476517 MYH4Q9Y623 1939 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 CYP2D7A0A087X1C5 515 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 ZBTB43O43298 467 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 RANBP6O60518 1105 aaKnown RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 BAG4O95429 457 aaKnown RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 ZSCAN22P10073 491 aaPredicted RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 SYT1P21579 422 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 RCAN1P53805 252 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 C12orf60Q5U649 245 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 LARP1BQ659C4 914 aaKnown RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 MAPKAPK5Q8IW41 473 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 NIM1KQ8IY84 436 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 STK11IPQ8N1F8 1099 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 LARGE2Q8N3Y3 721 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 SMARCC2Q8TAQ2 1214 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 MRIQ9BWK5 157 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 LY9Q9HBG7 655 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 MKRN1Q9UHC7 482 aaKnown RBP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 SLC12A7Q9Y666 1083 aa14.51□□□□□ -0.09
CDKAL1-203ENST00000476517 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 TNKSO95271 1327 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 PTPDC1A2A3K4 754 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 VPS37CA5D8V6 355 aaPredicted RBP14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 GOLGA8AA7E2F4 631 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 USP17L8P0C7I0 530 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 CRKP46108 304 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 RHBDL3P58872 404 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 CCDC178Q5BJE1 867 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 APOA5Q6Q788 366 aa14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
CDKAL1-203ENST00000476517 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms