RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 FAM160A1Q05DH4 1040 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 ST3GAL1Q11201 340 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 UVSSAQ2YD98 709 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 CCDC178Q5BJE1 867 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 RRAGBQ5VZM2 374 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 KRT40Q6A162 431 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 KIAA1328Q86T90 577 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 SMARCE1Q969G3 411 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 ANKIB1Q9P2G1 1089 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 RSPH14Q9UHP6 348 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 UBN2Q6ZU65 1347 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 ZNF532Q9HCE3 1301 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 KDRP35968 1356 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 ANKRD18BA2A2Z9 1011 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 GOLGA8HP0CJ92 632 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 PDIA3P30101 505 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 BAG6P46379 1132 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 GYG1P46976 350 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 NFIXQ14938 502 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 FBXO38Q6PIJ6 1188 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 DIS3L2Q8IYB7 885 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 KBTBD3Q8NAB2 608 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 NSUN7Q8NE18 718 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 DPF2Q92785 391 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 TTC14Q96N46 770 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 JADE2Q9NQC1 790 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 DCCP43146 1447 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 HEG1Q9ULI3 1381 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 FAM205CA6NFA0 338 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 MPHOSPH10O00566 681 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 NCBP1Q09161 790 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 PICALMQ13492 652 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 DLK2Q6UY11 383 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 KRT222Q8N1A0 295 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 JMYQ8N9B5 988 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 CELF1Q92879 486 aaKnown RBP5.7□□□□□ -1.5
CCDC39-204ENST00000476379 PDLIM2Q96JY6 352 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 TAB2Q9NYJ8 693 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 TBC1D7Q9P0N9 293 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 CTNNA3Q9UI47 895 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 PDE4DIPQ5VU43 2346 aa5.7□□□□□ -1.5
CCDC39-204ENST00000476379 MAST3O60307 1309 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 TSPY2A6NKD2 308 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 ERVV-2B6SEH9 535 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 ALDH1L1O75891 902 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 MTF1Q14872 753 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 WTAPQ15007 396 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 TBC1D10BQ4KMP7 808 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 ANO1Q5XXA6 986 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 SLF1Q9BQI6 1058 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 SAMSN1Q9NSI8 373 aaKnown RBP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 LTN1O94822 1766 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 CPDO75976 1380 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 EYA2O00167 538 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 PRKG1Q13976 671 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 TDRD12Q587J7 1177 aaKnown RBP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 MYSM1Q5VVJ2 828 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 PIK3AP1Q6ZUJ8 805 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 USP49Q70CQ1 688 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 GPKOWQ92917 476 aaPredicted RBP eCLIP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 NACAP1Q9BZK3 213 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 TSPYL1Q9H0U9 437 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 BCCIPQ9P287 314 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 KIF28PB7ZC32 967 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 C21orf2O43822 256 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 RBM5P52756 815 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 RTN1Q16799 776 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 FILIP1LQ4L180 1135 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 HEATR3Q7Z4Q2 680 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 ZSCAN29Q8IWY8 852 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 ANKRD20A12PQ8NF67 263 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 OSBPL3Q9H4L5 887 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 AATFQ9NY61 560 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC39-204ENST00000476379 STAP2Q9UGK3 403 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 CTNND2Q9UQB3 1225 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 PCDHA5Q9Y5H7 936 aa5.69□□□□□ -1.5
CCDC39-204ENST00000476379 SMTNL1A8MU46 457 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 H0YHG0 523 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 NMT2O60551 498 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 GRIN1Q05586 938 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 MAP3K12Q12852 859 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 MKNK2Q9HBH9 465 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KCNQ5Q9NR82 932 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KCNH3Q9ULD8 1083 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 ADCY9O60503 1353 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 SMIM23A6NLE4 172 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 KRT18P05783 430 aaKnown RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 GUCY1A2P33402 732 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 IGHMBP2P38935 993 aaKnown RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 GSPT2Q8IYD1 628 aaKnown RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 CNBD1Q8NA66 436 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 ZSCAN16Q9H4T2 348 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 BMP2KQ9NSY1 1161 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 HMG20BQ9P0W2 317 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 OVOS2A0A0G2JMS6 1433 aa5.68□□□□□ -1.5
CCDC39-204ENST00000476379 IL15P40933 162 aaPredicted RBP5.68□□□□□ -1.5
CCDC39-204ENST00000476379 ZFYVE27Q5T4F4 411 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms