RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 HSPA5P11021 654 aaKnown RBP5.65□□□□□ -1.5
VPS13D-206ENST00000476045 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
VPS13D-206ENST00000476045 EPB42P16452 691 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 ALAS2P22557 587 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 IDH3AP50213 366 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 ARSDP51689 593 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 C11orf91Q3C1V1 193 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 TMEM164Q5U3C3 297 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 MICALL1Q8N3F8 863 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 SYT17Q9BSW7 474 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 TMOD3Q9NYL9 352 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 KLK14Q9P0G3 267 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 POLKQ9UBT6 870 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 SERPINA10Q9UK55 444 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 KDM6AO15550 1401 aaPredicted RBP5.65□□□□□ -1.51
VPS13D-206ENST00000476045 ERVV-2B6SEH9 535 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 PPM1GO15355 546 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 LGR5O75473 907 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 SPATA31C1P0DKV0 1188 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 PHKG2P15735 406 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 RFX1P22670 979 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 CCINQ13939 588 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 EIF4A2Q14240 407 aaKnown RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 SUZ12Q15022 739 aaKnown RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 RAB44Q7Z6P3 723 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 PDGFDQ9GZP0 370 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 NAGPAQ9UK23 515 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 SLC6A14Q9UN76 642 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 KNSTRNQ9Y448 316 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 CNTNAP4Q9C0A0 1308 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 LAMB4A4D0S4 1761 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 C10orf71Q711Q0 1435 aa5.64□□□□□ -1.51
VPS13D-206ENST00000476045 COL3A1P02461 1466 aaPredicted RBP5.64□□□□□ -1.51
VPS13D-206ENST00000476045 NRXN2Q9P2S2 1712 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 BCORQ6W2J9 1755 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 LOC102724428A0A0B4J2F2 783 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 M0R082 166 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 TNFRSF10BO14763 440 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 OPLAHO14841 1288 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 GRIN3BO60391 1043 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 MICAL2O94851 1124 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 SIK1P57059 783 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 PLEKHO1Q53GL0 409 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-206ENST00000476045 C1orf141Q5JVX7 400 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 COX20Q5RI15 118 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 MPRIPQ6WCQ1 1025 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 CD163Q86VB7 1156 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 ZNF417Q8TAU3 575 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 ZNF587Q96SQ5 575 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-206ENST00000476045 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-206ENST00000476045 CD2APQ9Y5K6 639 aa5.63□□□□□ -1.51
VPS13D-206ENST00000476045 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-206ENST00000476045 TNRC6CQ9HCJ0 1690 aaKnown RBP5.63□□□□□ -1.51
VPS13D-206ENST00000476045 ARFGEF2Q9Y6D5 1785 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 ANP32CO43423 234 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 FBLN1P23142 703 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 CHRNA4P43681 627 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 ZNF530Q6P9A1 599 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-206ENST00000476045 MORC1Q86VD1 984 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 TRPM4Q8TD43 1214 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 PIGBQ92521 554 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 BHMTQ93088 406 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 POLR3GLQ9BT43 218 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 PLVAPQ9BX97 442 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 PANK3Q9H999 370 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 FRRS1LQ9P0K9 344 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 ZFATQ9P243 1243 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 KIF7Q2M1P5 1343 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 ADCY9O60503 1353 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 KCPQ6ZWJ8 1503 aa5.62□□□□□ -1.51
VPS13D-206ENST00000476045 N4BP2Q86UW6 1770 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-206ENST00000476045 PXDNLA1KZ92 1463 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 SPDYE3A6NKU9 549 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 C1QTNF9BB2RNN3 333 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 PRMT3O60678 531 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 ADAM23O75077 832 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 PTCD1O75127 700 aaKnown RBP5.61□□□□□ -1.51
VPS13D-206ENST00000476045 NFKB1P19838 968 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 AFDNP55196 1824 aaKnown RBP5.61□□□□□ -1.51
VPS13D-206ENST00000476045 GPLD1P80108 840 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 GPR162Q16538 588 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 C16orf46Q6P387 395 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 COL23A1Q86Y22 540 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-206ENST00000476045 ETFBKMTQ8IXQ9 262 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 TTC9Q92623 222 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 VTI1AQ96AJ9 217 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 CCDC97Q96F63 343 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-206ENST00000476045 IFT43Q96FT9 208 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 PRIMPOLQ96LW4 560 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 DNAJB12Q9NXW2 375 aaKnown RBP5.61□□□□□ -1.51
VPS13D-206ENST00000476045 KCNMB2Q9Y691 235 aa5.61□□□□□ -1.51
VPS13D-206ENST00000476045 TIAM2Q8IVF5 1701 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 SOX18P35713 384 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 NRLP54845 237 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 PCSK7Q16549 785 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 FAM26DQ5JW98 314 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 LINC00116Q8NCU8 138 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 ARID3AQ99856 593 aa5.6□□□□□ -1.51
VPS13D-206ENST00000476045 SAP130Q9H0E3 1048 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms