RNA–Protein interactions for RNA: ENST00000476041.1

LSM10-202, Transcript of LSM10, U7 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM10, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM10-202ENST00000476041 ADGRA1Q86SQ6 560 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 NBPF11Q86T75 865 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 ERC1Q8IUD2 1116 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
LSM10-202ENST00000476041 AATFQ9NY61 560 aaKnown RBP eCLIP17.24■□□□□ 0.35
LSM10-202ENST00000476041 SLC45A1Q9Y2W3 748 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 CDK5RAP2Q96SN8 1893 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 FOCADQ5VW36 1801 aa17.24■□□□□ 0.35
LSM10-202ENST00000476041 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 BCRP11274 1271 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 CTGFP29279 349 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
LSM10-202ENST00000476041 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
LSM10-202ENST00000476041 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 SIPA1L1O43166 1804 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 ATAD5Q96QE3 1844 aa17.23■□□□□ 0.35
LSM10-202ENST00000476041 SZT2Q5T011 3432 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 CYP2C8P10632 490 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 PSMC4P43686 418 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 GADL1Q6ZQY3 521 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 DHX36Q9H2U1 1008 aaKnown RBP17.22■□□□□ 0.35
LSM10-202ENST00000476041 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 TRIOBPQ9H2D6 2365 aa17.22■□□□□ 0.35
LSM10-202ENST00000476041 TRIM75PA6NK02 468 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 CAP2P40123 477 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 CCDC84Q86UT8 332 aaPredicted RBP17.21■□□□□ 0.35
LSM10-202ENST00000476041 TMEM106CQ9BVX2 250 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 SRRDQ9UH36 339 aa17.21■□□□□ 0.35
LSM10-202ENST00000476041 FLT1P17948 1338 aa17.21■□□□□ 0.34
LSM10-202ENST00000476041 OSBPP22059 807 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 HOXD10P28358 340 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 RRP1BQ14684 758 aaKnown RBP17.2■□□□□ 0.34
LSM10-202ENST00000476041 AACSQ86V21 672 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 MAPKAPK5Q8IW41 473 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 AGTPBP1Q9UPW5 1226 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 MGAMO43451 1857 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 LOC285556D6RIA3 1793 aa17.2■□□□□ 0.34
LSM10-202ENST00000476041 IDH1O75874 414 aaKnown RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 SPP2Q13103 211 aa17.19■□□□□ 0.34
LSM10-202ENST00000476041 TMED8Q6PL24 325 aaPredicted RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 METTL16Q86W50 562 aaKnown RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 PROCA1Q8NCQ7 364 aaPredicted RBP17.19■□□□□ 0.34
LSM10-202ENST00000476041 ZNF280CQ8ND82 737 aa17.19■□□□□ 0.34
LSM10-202ENST00000476041 RHPN1Q8TCX5 695 aa17.19■□□□□ 0.34
LSM10-202ENST00000476041 SH3TC2Q8TF17 1288 aa17.19■□□□□ 0.34
LSM10-202ENST00000476041 ZBTB40Q9NUA8 1239 aa17.19■□□□□ 0.34
LSM10-202ENST00000476041 USP17L5A8MUK1 530 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 ECM2O94769 699 aaPredicted RBP17.18■□□□□ 0.34
LSM10-202ENST00000476041 CYP7A1P22680 504 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 FCGRTP55899 365 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 CERS3Q8IU89 383 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
LSM10-202ENST00000476041 DNAJC18Q9H819 358 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 IL1RAPL2Q9NP60 686 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 MYPNQ86TC9 1320 aa17.18■□□□□ 0.34
LSM10-202ENST00000476041 HMMRO75330 724 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 DYNLL1P63167 89 aaKnown RBP17.17■□□□□ 0.34
LSM10-202ENST00000476041 TREML2Q5T2D2 321 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 MAGEB6Q8N7X4 407 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
LSM10-202ENST00000476041 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 AS3MTQ9HBK9 375 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 RCAN3Q9UKA8 241 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 PALD1Q9ULE6 856 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
LSM10-202ENST00000476041 ASNSP08243 561 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 MAP3K12Q12852 859 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 SLC4A8Q2Y0W8 1093 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 SH3D19Q5HYK7 790 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 RAET1EQ8TD07 263 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 KIF1BPQ96EK5 621 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 WDR18Q9BV38 432 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 PNMA3Q9UL41 463 aa17.16■□□□□ 0.34
LSM10-202ENST00000476041 GRK4P32298 578 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 HMGCS2P54868 508 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 PRKCZQ05513 592 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 CLASRPQ8N2M8 674 aaKnown RBP17.15■□□□□ 0.34
LSM10-202ENST00000476041 CRACR2BQ8N4Y2 399 aaPredicted RBP17.15■□□□□ 0.34
LSM10-202ENST00000476041 MIGA1Q8NAN2 632 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
LSM10-202ENST00000476041 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 MYH1P12882 1939 aa17.15■□□□□ 0.34
LSM10-202ENST00000476041 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.33
LSM10-202ENST00000476041 HLA-DOAP06340 250 aa17.14■□□□□ 0.33
LSM10-202ENST00000476041 JAG1P78504 1218 aa17.14■□□□□ 0.33
LSM10-202ENST00000476041 PABPC4Q13310 644 aaKnown RBP eCLIP17.14■□□□□ 0.336e-7■■■□□ 16.6
LSM10-202ENST00000476041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.14■□□□□ 0.33
LSM10-202ENST00000476041 TRIM34Q9BYJ4 488 aa17.14■□□□□ 0.33
LSM10-202ENST00000476041 SAP30BPQ9UHR5 308 aaKnown RBP17.14■□□□□ 0.33
LSM10-202ENST00000476041 CEP290O15078 2479 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms