RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZNF165P49910 485 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 FAM193AP78312 1265 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 CCZ1BP86790 482 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 CCZ1P86791 482 aaPredicted RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 TFCP2Q12800 502 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 HLFQ16534 295 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 ATP2B3Q16720 1220 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 SLFNL1Q499Z3 407 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 PARP10Q53GL7 1025 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 HSP90AB3PQ58FF7 597 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 GPR153Q6NV75 609 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 ANKRD13DQ6ZTN6 518 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 Q6ZUG5 572 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 COPS6Q7L5N1 327 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 LRRC8AQ8IWT6 810 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 DHX40Q8IX18 779 aaKnown RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 ELOA2Q8IYF1 753 aaPredicted RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 PLBD2Q8NHP8 589 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 XAGE3Q8WTP9 111 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 JARID2Q92833 1246 aaPredicted RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 RPGRQ92834 1020 aaKnown RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 TMX4Q9H1E5 349 aaPredicted RBP8.01□□□□□ -1.13
UBR4-212ENST00000475973 RTEL1Q9NZ71 1219 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 CTNNA3Q9UI47 895 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 RIC1Q4ADV7 1423 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 LAMA4Q16363 1823 aa8.01□□□□□ -1.13
UBR4-212ENST00000475973 DLEC1Q9Y238 1755 aa8□□□□□ -1.13
UBR4-212ENST00000475973 TNRC6CQ9HCJ0 1690 aaKnown RBP8□□□□□ -1.13
UBR4-212ENST00000475973 KLRG2A4D1S0 409 aaPredicted RBP8□□□□□ -1.13
UBR4-212ENST00000475973 IQCA1LA6NCM1 817 aa8□□□□□ -1.13
UBR4-212ENST00000475973 TUBB4AP04350 444 aa8□□□□□ -1.13
UBR4-212ENST00000475973 GPTP24298 496 aa8□□□□□ -1.13
UBR4-212ENST00000475973 PDIA3P30101 505 aaKnown RBP8□□□□□ -1.13
UBR4-212ENST00000475973 FKBP4Q02790 459 aaKnown RBP eCLIP8□□□□□ -1.13
UBR4-212ENST00000475973 FAM160A1Q05DH4 1040 aa8□□□□□ -1.13
UBR4-212ENST00000475973 NEXNQ0ZGT2 675 aa8□□□□□ -1.13
UBR4-212ENST00000475973 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
UBR4-212ENST00000475973 ADALQ6DHV7 355 aa8□□□□□ -1.13
UBR4-212ENST00000475973 PADI6Q6TGC4 694 aa8□□□□□ -1.13
UBR4-212ENST00000475973 TTLL7Q6ZT98 887 aa8□□□□□ -1.13
UBR4-212ENST00000475973 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
UBR4-212ENST00000475973 FERMT3Q86UX7 667 aa8□□□□□ -1.13
UBR4-212ENST00000475973 RTKN2Q8IZC4 609 aa8□□□□□ -1.13
UBR4-212ENST00000475973 PDCL2Q8N4E4 241 aa8□□□□□ -1.13
UBR4-212ENST00000475973 PXYLP1Q8TE99 480 aa8□□□□□ -1.13
UBR4-212ENST00000475973 KHSRPQ92945 711 aaKnown RBP eCLIP8□□□□□ -1.13
UBR4-212ENST00000475973 EDC3Q96F86 508 aaKnown RBP8□□□□□ -1.13
UBR4-212ENST00000475973 ZNF512BQ96KM6 892 aaPredicted RBP8□□□□□ -1.13
UBR4-212ENST00000475973 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
UBR4-212ENST00000475973 PLA2G12BQ9BX93 195 aa8□□□□□ -1.13
UBR4-212ENST00000475973 ADAM33Q9BZ11 813 aa8□□□□□ -1.13
UBR4-212ENST00000475973 GOLPH3LQ9H4A5 285 aa8□□□□□ -1.13
UBR4-212ENST00000475973 L2HGDHQ9H9P8 463 aa8□□□□□ -1.13
UBR4-212ENST00000475973 IMPACTQ9P2X3 320 aa8□□□□□ -1.13
UBR4-212ENST00000475973 TFIP11Q9UBB9 837 aaKnown RBP8□□□□□ -1.13
UBR4-212ENST00000475973 NRBP1Q9UHY1 535 aa8□□□□□ -1.13
UBR4-212ENST00000475973 ADGRG1Q9Y653 693 aa8□□□□□ -1.13
UBR4-212ENST00000475973 MORC2Q9Y6X9 1032 aaPredicted RBP8□□□□□ -1.13
UBR4-212ENST00000475973 POTEB2H3BUK9 544 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 YEATS4O95619 227 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 COL11A2P13942 1736 aaPredicted RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 IL15P40933 162 aaPredicted RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 PRELPP51888 382 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 LRMPQ12912 555 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 DHX8Q14562 1220 aaKnown RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 NCAPHQ15003 741 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 STX1AQ16623 288 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 CRY2Q49AN0 593 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 GRIPAP1Q4V328 841 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 C11orf57Q6ZUT1 292 aaPredicted RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 NBPF11Q86T75 865 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 LINC00301Q8NCQ3 95 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 KLHDC4Q8TBB5 520 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 TSC1Q92574 1164 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 PCMTD1Q96MG8 357 aaPredicted RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 TIGD1Q96MW7 591 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 USP28Q96RU2 1077 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 MYD88Q99836 296 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 DNAJC25Q9H1X3 360 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 POLR3EQ9NVU0 708 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 UBN2Q6ZU65 1347 aa7.99□□□□□ -1.13
UBR4-212ENST00000475973 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
UBR4-212ENST00000475973 NID2Q14112 1375 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 E7EWF7 191 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 KIF20AO95235 890 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 NTSR2O95665 410 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 HSPD1P10809 573 aaKnown RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 PRSS12P56730 875 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 AXDND1Q5T1B0 1012 aaPredicted RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 CKAP2LQ8IYA6 745 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 MB21D2Q8IYB1 491 aaPredicted RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 JDP2Q8WYK2 163 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 RBM17Q96I25 401 aaKnown RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 TCEANC2Q96MN5 208 aa7.98□□□□□ -1.13
UBR4-212ENST00000475973 ZNF396Q96N95 335 aaPredicted RBP7.98□□□□□ -1.13
UBR4-212ENST00000475973 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms