RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 IDH1O75874 414 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 CETPP11597 493 aa13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 BRI3BPQ8WY22 251 aa13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 PTCH2Q9Y6C5 1203 aa13.88□□□□□ -0.19
NUDCD3-206ENST00000475952 MAP3K12Q12852 859 aa13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 TTF1Q15361 905 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 SLC9C1Q4G0N8 1177 aa13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 TMED8Q6PL24 325 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 CERS3Q8IU89 383 aa13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 YTHDC1Q96MU7 727 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 PIH1D3Q9NQM4 214 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 PICK1Q9NRD5 415 aa13.87□□□□□ -0.19
NUDCD3-206ENST00000475952 PPP4CP60510 307 aa13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 TAF1CQ15572 869 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 ADGRA1Q86SQ6 560 aa13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 SCYL3Q8IZE3 742 aa13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 ZFYVE28Q9HCC9 887 aa13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 ZCCHC17Q9NP64 241 aaKnown RBP13.86□□□□□ -0.19
NUDCD3-206ENST00000475952 TBC1D12O60347 775 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 CYP7A1P22680 504 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 RRP1P56182 461 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 FAM43AQ8N2R8 423 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 LRRCC1Q9C099 1032 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 NDUFB9Q9Y6M9 179 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 FLT1P17948 1338 aa13.85□□□□□ -0.19
NUDCD3-206ENST00000475952 PHF20L1A8MW92 1017 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 SLC4A8Q2Y0W8 1093 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 MAPKAPK5Q8IW41 473 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 TGFBRAP1Q8WUH2 860 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 DNAJC2Q99543 621 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 ANTXR1Q9H6X2 564 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 HERC5Q9UII4 1024 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 KCNH4Q9UQ05 1017 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 DOCK3Q8IZD9 2030 aa13.84□□□□□ -0.19
NUDCD3-206ENST00000475952 DLL1O00548 723 aa13.83□□□□□ -0.2
NUDCD3-206ENST00000475952 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-206ENST00000475952 TRIM34Q9BYJ4 488 aa13.83□□□□□ -0.2
NUDCD3-206ENST00000475952 RBM27Q9P2N5 1060 aaKnown RBP13.83□□□□□ -0.2
NUDCD3-206ENST00000475952 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
NUDCD3-206ENST00000475952 FAM196BA6NMK8 535 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 GOLIM4O00461 696 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 CXCL11O14625 94 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 HLA-DOAP06340 250 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 PTPRAP18433 802 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 DYNLL1P63167 89 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 ANKRD23Q86SG2 305 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 SH3TC2Q8TF17 1288 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 SHISA4Q96DD7 197 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 ZHX2Q9Y6X8 837 aa13.82□□□□□ -0.2
NUDCD3-206ENST00000475952 TLR2O60603 784 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 SLURP2P0DP57 97 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 USP5P45974 858 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 CRACR2BQ8N4Y2 399 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 PAG1Q9NWQ8 432 aa13.81□□□□□ -0.2
NUDCD3-206ENST00000475952 ALPK3Q96L96 1907 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 PDE6AP16499 860 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 ATP5JP18859 108 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 SLC9C2Q5TAH2 1124 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 FASTKD5Q7L8L6 764 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 SLC17A8Q8NDX2 589 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 GPATCH3Q96I76 525 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 ARHGAP39Q9C0H5 1083 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 PRO3102Q9H379 93 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 BOLA2Q9H3K6 86 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 PALD1Q9ULE6 856 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 AFG3L2Q9Y4W6 797 aa13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 LAMA2P24043 3122 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-206ENST00000475952 MAGEB6P1A0A0J9YX57 407 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 PDHXO00330 501 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 CAP2P40123 477 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 GADL1Q6ZQY3 521 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 FOXP4Q8IVH2 680 aaPredicted RBP13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 SAP30BPQ9UHR5 308 aaKnown RBP13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 ZNF532Q9HCE3 1301 aa13.79□□□□□ -0.2
NUDCD3-206ENST00000475952 VCANP13611 3396 aa13.78□□□□□ -0.2
NUDCD3-206ENST00000475952 TRIM75PA6NK02 468 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms