RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 MIGA2Q7L4E1 593 aa26.46■■□□□ 1.83
MCF2L2-209ENST00000475664 GBA2Q9HCG7 927 aaPredicted RBP26.46■■□□□ 1.83
MCF2L2-209ENST00000475664 HERC5Q9UII4 1024 aaKnown RBP26.46■■□□□ 1.83
MCF2L2-209ENST00000475664 FZD1Q9UP38 647 aa26.46■■□□□ 1.83
MCF2L2-209ENST00000475664 ROBO3Q96MS0 1386 aa26.46■■□□□ 1.83
MCF2L2-209ENST00000475664 GABPAQ06546 454 aa26.45■■□□□ 1.82
MCF2L2-209ENST00000475664 LSG1Q9H089 658 aaKnown RBP26.45■■□□□ 1.82
MCF2L2-209ENST00000475664 DNAJC18Q9H819 358 aa26.45■■□□□ 1.82
MCF2L2-209ENST00000475664 SERPINB13Q9UIV8 391 aa26.45■■□□□ 1.82
MCF2L2-209ENST00000475664 MYH8P13535 1937 aa26.45■■□□□ 1.82
MCF2L2-209ENST00000475664 FAM196BA6NMK8 535 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 MINDY4BA8MYZ0 360 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 PPP1R12BO60237 982 aaPredicted RBP26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 USP2O75604 605 aaPredicted RBP26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 FKBP1BP68106 108 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 PRKG1Q13976 671 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 MAP3K11Q16584 847 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 KIAA1211Q6ZU35 1233 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 ZNF341Q9BYN7 854 aa26.44■■□□□ 1.82
MCF2L2-209ENST00000475664 MOB2Q70IA6 237 aa26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 CRACR2BQ8N4Y2 399 aaPredicted RBP26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 C2orf69Q8N8R5 385 aa26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 MAP4K1Q92918 833 aa26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 ANO2Q9NQ90 1003 aa26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 TAOK2Q9UL54 1235 aa26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 ANGEL1Q9UNK9 670 aaKnown RBP26.43■■□□□ 1.82
MCF2L2-209ENST00000475664 APLP1P51693 650 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 PPARAQ07869 468 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 TTLL12Q14166 644 aaPredicted RBP26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 ARMC9Q7Z3E5 817 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 KLRG1Q96E93 195 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 DYNLL2Q96FJ2 89 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 ZNF112Q9UJU3 913 aa26.42■■□□□ 1.82
MCF2L2-209ENST00000475664 TMEM88BA6NKF7 163 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 C1QTNF8P60827 252 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 C16orf86Q6ZW13 317 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 TRIM34Q9BYJ4 488 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 CTNNA3Q9UI47 895 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 ANAPC4Q9UJX5 808 aa26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 U3KPZ7 1027 aaPredicted RBP26.41■■□□□ 1.82
MCF2L2-209ENST00000475664 ATAD5Q96QE3 1844 aa26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 PHF20L1A8MW92 1017 aa26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 IREB2P48200 963 aaKnown RBP26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 SLC44A5Q8NCS7 719 aa26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 SWAP70Q9UH65 585 aa26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 DOCK1Q14185 1865 aa26.4■■□□□ 1.82
MCF2L2-209ENST00000475664 SHMT1P34896 483 aa26.39■■□□□ 1.82
MCF2L2-209ENST00000475664 C8orf34Q49A92 452 aa26.39■■□□□ 1.82
MCF2L2-209ENST00000475664 LDLRAD1Q5T700 205 aa26.39■■□□□ 1.82
MCF2L2-209ENST00000475664 WRNIP1Q96S55 665 aa26.39■■□□□ 1.82
MCF2L2-209ENST00000475664 RBM8AQ9Y5S9 174 aaKnown RBP26.39■■□□□ 1.82
MCF2L2-209ENST00000475664 UBE2Q2LH0YL09 131 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 REC8O95072 547 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 HAND2P61296 217 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 RRP1BQ14684 758 aaKnown RBP26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 TATDN1Q6P1N9 297 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 NBPF3Q9H094 633 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 TLL2Q9Y6L7 1015 aa26.38■■□□□ 1.81
MCF2L2-209ENST00000475664 INPP5BP32019 993 aa26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 CDK8P49336 464 aa26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 CTDSPL2Q05D32 466 aa26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 IMMTQ16891 758 aaKnown RBP26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 SAPCD2Q86UD0 394 aa26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 CREBZFQ9NS37 354 aa26.37■■□□□ 1.81
MCF2L2-209ENST00000475664 ZNF213O14771 459 aa26.36■■□□□ 1.81
MCF2L2-209ENST00000475664 SLC3A2P08195 630 aaKnown RBP26.36■■□□□ 1.81
MCF2L2-209ENST00000475664 MAP3K9P80192 1104 aa26.36■■□□□ 1.81
MCF2L2-209ENST00000475664 ANKRD13AQ8IZ07 590 aa26.36■■□□□ 1.81
MCF2L2-209ENST00000475664 STK11IPQ8N1F8 1099 aa26.36■■□□□ 1.81
MCF2L2-209ENST00000475664 UNCXA6NJT0 531 aa26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 HUNKP57058 714 aa26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 TBC1D10CQ8IV04 446 aa26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 ZKSCAN4Q969J2 545 aaPredicted RBP26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 TACC3Q9Y6A5 838 aa26.35■■□□□ 1.81
MCF2L2-209ENST00000475664 CTNND1O60716 968 aaKnown RBP26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 FGRP09769 529 aa26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 CAP2P40123 477 aa26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 VGLL4Q14135 290 aa26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 NECTIN1Q15223 517 aa26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 NOL9Q5SY16 702 aaKnown RBP26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 ABT1Q9ULW3 272 aaKnown RBP26.34■■□□□ 1.81
MCF2L2-209ENST00000475664 EPB41L2O43491 1005 aaKnown RBP26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 CYP21A2P08686 494 aa26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 PDE4BQ07343 736 aa26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 STAG1Q8WVM7 1258 aa26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 CLMNQ96JQ2 1002 aa26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 SNCAIPQ9Y6H5 919 aa26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 GREB1LQ9C091 1923 aaPredicted RBP26.33■■□□□ 1.81
MCF2L2-209ENST00000475664 RASA1P20936 1047 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 JAG1P78504 1218 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 CERKLQ49MI3 558 aaPredicted RBP26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 AKNAD1Q5T1N1 836 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 SCYL3Q8IZE3 742 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 ZNF287Q9HBT7 754 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 INCENPQ9NQS7 918 aa26.32■■□□□ 1.8
MCF2L2-209ENST00000475664 CSADQ9Y600 493 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms