RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CDK8P49336 464 aa10.91□□□□□ -0.66
SMC5-203ENST00000475540 CDK5R2Q13319 367 aa10.91□□□□□ -0.66
SMC5-203ENST00000475540 INTS5Q6P9B9 1019 aaKnown RBP10.91□□□□□ -0.66
SMC5-203ENST00000475540 WNT10AQ9GZT5 417 aa10.91□□□□□ -0.66
SMC5-203ENST00000475540 KBTBD4Q9NVX7 518 aa10.91□□□□□ -0.66
SMC5-203ENST00000475540 NTF4P34130 210 aa10.9□□□□□ -0.66
SMC5-203ENST00000475540 ETF1P62495 437 aaKnown RBP10.9□□□□□ -0.66
SMC5-203ENST00000475540 RPL6Q02878 288 aaKnown RBP10.9□□□□□ -0.66
SMC5-203ENST00000475540 CYP27C1Q4G0S4 372 aa10.9□□□□□ -0.66
SMC5-203ENST00000475540 ERMP1Q7Z2K6 904 aa10.9□□□□□ -0.66
SMC5-203ENST00000475540 GFRA2O00451 464 aa10.89□□□□□ -0.67
SMC5-203ENST00000475540 SSTR4P31391 388 aa10.89□□□□□ -0.67
SMC5-203ENST00000475540 BNC2Q6ZN30 1099 aaPredicted RBP10.89□□□□□ -0.67
SMC5-203ENST00000475540 RHOVQ96L33 236 aa10.89□□□□□ -0.67
SMC5-203ENST00000475540 COPRSQ9NQ92 184 aa10.89□□□□□ -0.67
SMC5-203ENST00000475540 TACC3Q9Y6A5 838 aa10.89□□□□□ -0.67
SMC5-203ENST00000475540 BPNT1O95861 308 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 LRP8Q14114 963 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 ZNF765Q7L2R6 523 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 GATAD2BQ8WXI9 593 aa10.88□□□□□ -0.67
SMC5-203ENST00000475540 CYP26A1O43174 497 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 FAM87AP0C7U9 286 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 VAMP1P23763 118 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 FAM160A1Q05DH4 1040 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 ARTNQ5T4W7 220 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 GOLM1Q8NBJ4 401 aa10.87□□□□□ -0.67
SMC5-203ENST00000475540 F13A1P00488 732 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 FOSL1P15407 271 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 GRK4P32298 578 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 ZNF76P36508 570 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 PDE4BQ07343 736 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 HID1Q8IV36 788 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 MRRFQ96E11 262 aaKnown RBP10.86□□□□□ -0.67
SMC5-203ENST00000475540 PSMG3-AS1Q96PY0 264 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 ZFP64Q9NPA5 681 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 PCMTD2Q9NV79 361 aa10.86□□□□□ -0.67
SMC5-203ENST00000475540 FAM221AA4D161 298 aa10.85□□□□□ -0.67
SMC5-203ENST00000475540 HYAL3O43820 417 aaPredicted RBP10.85□□□□□ -0.67
SMC5-203ENST00000475540 CILPO75339 1184 aa10.85□□□□□ -0.67
SMC5-203ENST00000475540 EIF4A3P38919 411 aaKnown RBP10.85□□□□□ -0.67
SMC5-203ENST00000475540 CD97P48960 835 aa10.85□□□□□ -0.67
SMC5-203ENST00000475540 UBE3DQ7Z6J8 389 aa10.85□□□□□ -0.67
SMC5-203ENST00000475540 DUSP23Q9BVJ7 150 aa10.85□□□□□ -0.67
SMC5-203ENST00000475540 METTL5Q9NRN9 209 aaKnown RBP10.85□□□□□ -0.67
SMC5-203ENST00000475540 Q8N3U1 123 aa10.84□□□□□ -0.67
SMC5-203ENST00000475540 TOP6BLQ8N6T0 577 aa10.84□□□□□ -0.67
SMC5-203ENST00000475540 LRRC4CQ9HCJ2 640 aa10.84□□□□□ -0.67
SMC5-203ENST00000475540 LRIG2O94898 1065 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 MED26O95402 600 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 PGRP06401 933 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 HOXA10P31260 410 aaPredicted RBP10.83□□□□□ -0.68
SMC5-203ENST00000475540 FBXL19Q6PCT2 694 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 FOXQ1Q9C009 403 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 FBRSQ9HAH7 460 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 PRDM10Q9NQV6 1147 aa10.83□□□□□ -0.68
SMC5-203ENST00000475540 SUPT16HQ9Y5B9 1047 aaKnown RBP10.83□□□□□ -0.68
SMC5-203ENST00000475540 ROBO2Q9HCK4 1378 aa10.82□□□□□ -0.68
SMC5-203ENST00000475540 SCAMP3O14828 347 aaKnown RBP10.82□□□□□ -0.68
SMC5-203ENST00000475540 LEFTY1O75610 366 aa10.82□□□□□ -0.68
SMC5-203ENST00000475540 RNF34Q969K3 372 aa10.82□□□□□ -0.68
SMC5-203ENST00000475540 PODXL2Q9NZ53 605 aa10.82□□□□□ -0.68
SMC5-203ENST00000475540 GARTP22102 1010 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 CAP2P40123 477 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 FANCCQ00597 558 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 MPP2Q14168 576 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 SLBPQ14493 270 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMC5-203ENST00000475540 FAM196AQ6ZSG2 479 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 ARMCX6Q7L4S7 300 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 MFSD2AQ8NA29 543 aa10.81□□□□□ -0.68
SMC5-203ENST00000475540 ZNF296Q8WUU4 475 aaPredicted RBP10.81□□□□□ -0.68
SMC5-203ENST00000475540 RECKO95980 971 aa10.8□□□□□ -0.68
SMC5-203ENST00000475540 NKG7Q16617 165 aa10.8□□□□□ -0.68
SMC5-203ENST00000475540 KCNQ5Q9NR82 932 aa10.8□□□□□ -0.68
SMC5-203ENST00000475540 KIAA1324LA8MWY0 1029 aaPredicted RBP10.79□□□□□ -0.68
SMC5-203ENST00000475540 GREM1O60565 184 aa10.79□□□□□ -0.68
SMC5-203ENST00000475540 ARHGAP27Q6ZUM4 889 aa10.79□□□□□ -0.68
SMC5-203ENST00000475540 ADAM30Q9UKF2 790 aa10.79□□□□□ -0.68
SMC5-203ENST00000475540 UNCXA6NJT0 531 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 TLR3O15455 904 aaKnown RBP10.78□□□□□ -0.68
SMC5-203ENST00000475540 PLCG1P19174 1290 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 CWF19L2Q2TBE0 894 aaKnown RBP10.78□□□□□ -0.68
SMC5-203ENST00000475540 SLC6A19Q695T7 634 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 NBPF11Q86T75 865 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 USP48Q86UV5 1035 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 DTX1Q86Y01 620 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 KIAA1522Q9P206 1035 aaPredicted RBP10.78□□□□□ -0.68
SMC5-203ENST00000475540 TJP2Q9UDY2 1190 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 ADAMTS1Q9UHI8 967 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 GTF2IRD1Q9UHL9 959 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 CORINQ9Y5Q5 1042 aa10.78□□□□□ -0.68
SMC5-203ENST00000475540 CST3P01034 146 aaPredicted RBP10.77□□□□□ -0.69
SMC5-203ENST00000475540 REC114Q7Z4M0 266 aa10.77□□□□□ -0.69
SMC5-203ENST00000475540 MCATQ8IVS2 390 aaKnown RBP10.77□□□□□ -0.69
SMC5-203ENST00000475540 MRPL41Q8IXM3 137 aaKnown RBP10.77□□□□□ -0.69
SMC5-203ENST00000475540 FBXO27Q8NI29 283 aa10.77□□□□□ -0.69
SMC5-203ENST00000475540 TMEM87BQ96K49 555 aa10.77□□□□□ -0.69
SMC5-203ENST00000475540 ZC3H7BQ9UGR2 993 aaKnown RBP10.77□□□□□ -0.69
SMC5-203ENST00000475540 MSMPQ1L6U9 139 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms