RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 SLURP2P0DP57 97 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 CLCN6P51797 869 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 HAND2P61296 217 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 PPARAQ07869 468 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 TSGA10IPQ3SY00 556 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 EAPPQ56P03 285 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-206ENST00000474648 DLK2Q6UY11 383 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 METTL16Q86W50 562 aaKnown RBP11.92□□□□□ -0.5
COL8A1-206ENST00000474648 APOBEC3FQ8IUX4 373 aaKnown RBP11.92□□□□□ -0.5
COL8A1-206ENST00000474648 DDRGK1Q96HY6 314 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 C22orf23Q9BZE7 217 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 TMEM39BQ9GZU3 492 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 ARPP21Q9UBL0 812 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-206ENST00000474648 ATRNL1Q5VV63 1379 aa11.92□□□□□ -0.5
COL8A1-206ENST00000474648 ZNF213O14771 459 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 POLR3DP05423 398 aaPredicted RBP11.91□□□□□ -0.5
COL8A1-206ENST00000474648 FGRP09769 529 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 TNNI2P48788 182 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 RBM25P49756 843 aaKnown RBP11.91□□□□□ -0.5
COL8A1-206ENST00000474648 MAP3K10Q02779 954 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 GABPAQ06546 454 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 IMMTQ16891 758 aaKnown RBP11.91□□□□□ -0.5
COL8A1-206ENST00000474648 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 STOX1Q6ZVD7 989 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 TBC1D10CQ8IV04 446 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 NKX2-3Q8TAU0 364 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 DCPSQ96C86 337 aaKnown RBP11.91□□□□□ -0.5
COL8A1-206ENST00000474648 IL17RAQ96F46 866 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 DHX36Q9H2U1 1008 aaKnown RBP11.91□□□□□ -0.5
COL8A1-206ENST00000474648 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
COL8A1-206ENST00000474648 TNFAIP1Q13829 316 aa11.9□□□□□ -0.5
COL8A1-206ENST00000474648 COL9A3Q14050 684 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-206ENST00000474648 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
COL8A1-206ENST00000474648 FOXP4Q8IVH2 680 aaPredicted RBP11.9□□□□□ -0.5
COL8A1-206ENST00000474648 TBC1D32Q96NH3 1257 aa11.9□□□□□ -0.5
COL8A1-206ENST00000474648 KIF2CQ99661 725 aa11.9□□□□□ -0.5
COL8A1-206ENST00000474648 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
COL8A1-206ENST00000474648 COL2A1P02458 1487 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 SCN4AP35499 1836 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 ADM5C9JUS6 153 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 E7EWF7 191 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 KIF3CO14782 793 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 ADCK5Q3MIX3 580 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 RNF20Q5VTR2 975 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 MAP1SQ66K74 1059 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 KRT26Q7Z3Y9 468 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 SLC44A5Q8NCS7 719 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 GLIS2Q9BZE0 524 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 EHD4Q9H223 541 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL8A1-206ENST00000474648 PPP2R3BQ9Y5P8 575 aa11.89□□□□□ -0.51
COL8A1-206ENST00000474648 MAP3K13O43283 966 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 TBC1D12O60347 775 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 HLA-DOAP06340 250 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 MCCP23508 829 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 CDK8P49336 464 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 ANAPC15P60006 121 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 RRP1BQ14684 758 aaKnown RBP11.88□□□□□ -0.51
COL8A1-206ENST00000474648 AKNAD1Q5T1N1 836 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 CSRNP1Q96S65 589 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 UPF2Q9HAU5 1272 aaKnown RBP11.88□□□□□ -0.51
COL8A1-206ENST00000474648 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-206ENST00000474648 SERPINB13Q9UIV8 391 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 ROBO3Q96MS0 1386 aa11.88□□□□□ -0.51
COL8A1-206ENST00000474648 FAM196BA6NMK8 535 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 ORC4O43929 436 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 ZKSCAN1P17029 563 aaPredicted RBP11.87□□□□□ -0.51
COL8A1-206ENST00000474648 YY1P25490 414 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 SHMT1P34896 483 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 GSE1Q14687 1217 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 TATDN1Q6P1N9 297 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 MIGA2Q7L4E1 593 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 AMOTL1Q8IY63 956 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
COL8A1-206ENST00000474648 NEDD4P46934 1319 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 PHF20L1A8MW92 1017 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 PRDM1O75626 825 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 ITGBL1O95965 494 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 SLC3A2P08195 630 aaKnown RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 PYGBP11216 843 aa11.86□□□□□ -0.51
COL8A1-206ENST00000474648 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
COL8A1-206ENST00000474648 RASA1P20936 1047 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms