RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 PIM2Q9P1W9 311 aa23.19■■□□□ 1.3
SSR1-204ENST00000474597 MYH1P12882 1939 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 SCN9AQ15858 1988 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 H3BQV1 296 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 SCNN1DP51172 638 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 RHBDL3P58872 404 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 FOXD4L6Q3SYB3 417 aaPredicted RBP23.18■■□□□ 1.3
SSR1-204ENST00000474597 IFFO2Q5TF58 517 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 FOXD4L3Q6VB84 417 aaPredicted RBP23.18■■□□□ 1.3
SSR1-204ENST00000474597 MICU3Q86XE3 530 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 UPF1Q92900 1129 aaKnown RBP eCLIP23.18■■□□□ 1.32e-12■■■■■ 32.9
SSR1-204ENST00000474597 PSMD1Q99460 953 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 SENP2Q9HC62 589 aa23.18■■□□□ 1.3
SSR1-204ENST00000474597 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.18■■□□□ 1.3
SSR1-204ENST00000474597 FOCADQ5VW36 1801 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 SKOR2Q2VWA4 1001 aaPredicted RBP23.17■■□□□ 1.3
SSR1-204ENST00000474597 PPP1R1BQ9UD71 204 aaPredicted RBP23.17■■□□□ 1.3
SSR1-204ENST00000474597 SAP30BPQ9UHR5 308 aaKnown RBP23.17■■□□□ 1.3
SSR1-204ENST00000474597 TNKSO95271 1327 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 GOLGA8AA7E2F4 631 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 NT5C2P49902 561 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 HHIPL2Q6UWX4 724 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 CDC37L1Q7L3B6 337 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 ZSCAN10Q96SZ4 725 aaPredicted RBP23.17■■□□□ 1.3
SSR1-204ENST00000474597 FLT1P17948 1338 aa23.17■■□□□ 1.3
SSR1-204ENST00000474597 CDKL5O76039 1030 aa23.16■■□□□ 1.3
SSR1-204ENST00000474597 EVX2Q03828 476 aa23.16■■□□□ 1.3
SSR1-204ENST00000474597 TCHHQ07283 1943 aa23.16■■□□□ 1.3
SSR1-204ENST00000474597 DACT2Q5SW24 774 aa23.16■■□□□ 1.3
SSR1-204ENST00000474597 TSPY2A6NKD2 308 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 RXRAP19793 462 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 ZNF287Q9HBT7 754 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 ROBO3Q96MS0 1386 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 IFIT1BQ5T764 474 aaKnown RBP23.15■■□□□ 1.3
SSR1-204ENST00000474597 KIAA0825Q8IV33 1275 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 LARGE2Q8N3Y3 721 aa23.15■■□□□ 1.3
SSR1-204ENST00000474597 CRKP46108 304 aa23.14■■□□□ 1.29
SSR1-204ENST00000474597 CCDC144CPQ8IYA2 1237 aa23.14■■□□□ 1.29
SSR1-204ENST00000474597 CHAMP1Q96JM3 812 aa23.14■■□□□ 1.29
SSR1-204ENST00000474597 MYL10Q9BUA6 226 aa23.14■■□□□ 1.29
SSR1-204ENST00000474597 USP40Q9NVE5 1235 aa23.14■■□□□ 1.29
SSR1-204ENST00000474597 ZNF646O15015 1829 aaPredicted RBP23.14■■□□□ 1.29
SSR1-204ENST00000474597 DDX60LQ5H9U9 1706 aaKnown RBP23.13■■□□□ 1.29
SSR1-204ENST00000474597 PPFIA3O75145 1194 aa23.13■■□□□ 1.29
SSR1-204ENST00000474597 PRPF40AO75400 957 aaKnown RBP23.13■■□□□ 1.29
SSR1-204ENST00000474597 SEC23AQ15436 765 aa23.13■■□□□ 1.29
SSR1-204ENST00000474597 DALRD3Q5D0E6 543 aaKnown RBP23.13■■□□□ 1.29
SSR1-204ENST00000474597 ORC3Q9UBD5 711 aaPredicted RBP23.13■■□□□ 1.29
SSR1-204ENST00000474597 ADAMTSL1Q8N6G6 1762 aa23.13■■□□□ 1.29
SSR1-204ENST00000474597 ADD1P35611 737 aaKnown RBP23.12■■□□□ 1.29
SSR1-204ENST00000474597 PICALMQ13492 652 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 FAM47AQ5JRC9 791 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 ENAHQ8N8S7 591 aaPredicted RBP23.12■■□□□ 1.29
SSR1-204ENST00000474597 DYNLL2Q96FJ2 89 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 MRIQ9BWK5 157 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 VPS33BQ9H267 617 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
SSR1-204ENST00000474597 PSME4Q14997 1843 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 ECM29Q5VYK3 1845 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 PLCD1P51178 756 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 RBM5P52756 815 aaKnown RBP eCLIP23.12■■□□□ 1.29
SSR1-204ENST00000474597 FOSBP53539 338 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 RCAN1P53805 252 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 HDLBPQ00341 1268 aaKnown RBP23.12■■□□□ 1.29
SSR1-204ENST00000474597 ZNF654Q8IZM8 581 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 ZNF444Q8N0Y2 327 aaPredicted RBP23.12■■□□□ 1.29
SSR1-204ENST00000474597 LMBRD1Q9NUN5 540 aa23.12■■□□□ 1.29
SSR1-204ENST00000474597 CCDC196A0A1B0GTZ2 297 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 PSDA5PKW4 1024 aaPredicted RBP23.11■■□□□ 1.29
SSR1-204ENST00000474597 NCLP19338 710 aaKnown RBP23.11■■□□□ 1.29
SSR1-204ENST00000474597 CDC27P30260 824 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 RTN1Q16799 776 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 CATIPQ7Z7H3 387 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 FERMT3Q86UX7 667 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 NUP133Q8WUM0 1156 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 ZDHHC15Q96MV8 337 aa23.11■■□□□ 1.29
SSR1-204ENST00000474597 DDX49Q9Y6V7 483 aaKnown RBP23.11■■□□□ 1.29
SSR1-204ENST00000474597 YDJCA8MPS7 323 aa23.1■■□□□ 1.29
SSR1-204ENST00000474597 BRCA1P38398 1863 aaKnown RBP23.1■■□□□ 1.29
SSR1-204ENST00000474597 NID2Q14112 1375 aa23.1■■□□□ 1.29
SSR1-204ENST00000474597 FDPSP14324 419 aaKnown RBP23.1■■□□□ 1.29
SSR1-204ENST00000474597 TFAP4Q01664 338 aa23.1■■□□□ 1.29
SSR1-204ENST00000474597 CDC42EP5Q6NZY7 148 aa23.1■■□□□ 1.29
SSR1-204ENST00000474597 CD2APQ9Y5K6 639 aa23.1■■□□□ 1.29
SSR1-204ENST00000474597 CCDC178Q5BJE1 867 aa23.09■■□□□ 1.29
SSR1-204ENST00000474597 APOBEC3HQ6NTF7 200 aaKnown RBP23.09■■□□□ 1.29
SSR1-204ENST00000474597 TTC6Q86TZ1 520 aa23.09■■□□□ 1.29
SSR1-204ENST00000474597 ZSCAN16Q9H4T2 348 aaPredicted RBP23.09■■□□□ 1.29
SSR1-204ENST00000474597 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
SSR1-204ENST00000474597 TSPY3P0CV98 308 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 TSPY8P0CW00 308 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 IARSP41252 1262 aaKnown RBP23.08■■□□□ 1.29
SSR1-204ENST00000474597 PPP2R5BQ15173 497 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 CSPP1Q1MSJ5 1256 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 C16orf86Q6ZW13 317 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 NIM1KQ8IY84 436 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 C8orf76Q96K31 380 aa23.08■■□□□ 1.29
SSR1-204ENST00000474597 MYO3BQ8WXR4 1341 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms